Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq18886 96.9 4e-15
>seq18886
Length=112513
Score = 96.9 bits (106), Expect = 4e-15
Identities = 168/242 (69%), Gaps = 2/242 (1%)
Strand=Plus/Plus
Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923
|||| ||| | ||||| || ||||| || || | || || || || ||| ||| |
Sbjct 87299 TGTCTTGTTTAATGATAACGTACCCGTCGACGAACGGCGTTTTCGAGGA-AACGATAGGC 87357
Query 154924 -AGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982
| ||||| ||| ||||| ||| || || || |||||| | |||||||| || |
Sbjct 87358 GACATATGCGCGATGGTTCACGACGCGGGGGGCCAAGTATATTTAGATGGAGCTAACATG 87417
Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042
|||||||| || || || || | || || || || || | ||| | ||
Sbjct 87418 AATGCACAAGTTGGCCTTTGCCGTCCTGGCGATTACGGCAGCGACGTTTCGCATTTGAAT 87477
Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102
||||||||||| |||||||| || ||||| |||||||| ||||| | |||||||||||
Sbjct 87478 TTACATAAAACTTTCTGTATACCTCATGGCGGTGGAGGACCTGGGATGGGTCCTATAGGA 87537
Query 155103 GT 155104
||
Sbjct 87538 GT 87539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578846679589120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |