Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq16708 190 5e-43
seq21718 118 2e-21
>seq16708
Length=1145218
Score = 190 bits (210), Expect = 5e-43
Identities = 176/223 (79%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||| | ||| || ||||| || |||||||| || || || ||||||| ||| ||
Sbjct 1010110 TCTCAGTCGTAGAACCAGATGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAAAGCGT 1010169
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||||||||| || || || |||||||| | |||||||||||| |||||||| ||
Sbjct 1010170 TCTTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCC 1010229
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||| |||||||| |||||| ||||| || ||||| ||| || || || ||
Sbjct 1010230 TTCTTTGTCCTGAATTTTGGCCTTGACATTCTCGATCGTGTCGGAAGCCTCAACCTCGAG 1010289
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| | ||| || |||||||| || ||||| || | ||||||
Sbjct 1010290 GGTTATCGTTTTGCCTGTCAACGTCTTTACAAAAATCTGCATT 1010332
Score = 190 bits (210), Expect = 5e-43
Identities = 168/210 (80%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || |||||||| |||||||| ||||||||||| | || || | |||||||||
Sbjct 1010807 ACAAGATGCAGAGTGGATTCTTTTTGTATATTGTAATCAGAGAGTGTGCGTCCATCTTCG 1010866
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| || || || |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct 1010867 AGTTGTTTTCCAGCGAAGATCAGTCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCTTGA 1010926
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| ||||| || || ||| || || || ||||| | ||||||
Sbjct 1010927 ATCTTGGCCTTGACGTTTTCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTG 1010986
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|||||||| || || || || | ||||||
Sbjct 1010987 CCTGTCAACGTCTTGACAAAAATCTGCATT 1011016
Score = 187 bits (206), Expect = 6e-42
Identities = 168/211 (80%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || ||||||||||| || || || ||||||||||| | || || | ||||||||
Sbjct 1011034 AACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGTCCATCTTC 1011093
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||| || || || |||||||| | |||||||||||| |||||||| ||||||||||| ||
Sbjct 1011094 GAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCCTG 1011153
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|||||| ||||||||||||||| || || ||| || || || ||||| | ||||||
Sbjct 1011154 AATTTTGGCCTTGACGTTCTCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTT 1011213
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| |||||||| || || || | ||||||
Sbjct 1011214 TCCAGTCAAAGTCTTGACAAAAATCTGCATT 1011244
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||| | ||| || ||||||||||| || || || ||||||||||| | || ||
Sbjct 1011250 TCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGT 1011309
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||||| || || || |||||||| | |||||||||||| |||||||| ||
Sbjct 1011310 GCGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCC 1011369
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||| |||||||| ||||||||||||||| || || ||| || || || ||
Sbjct 1011370 TTCTTTGTCCTGAATTTTGGCCTTGACGTTCTCAATCGTATCGGAAGCCTCAACCTCGAG 1011429
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | |||||| ||||| || || || ||||| | |||||
Sbjct 1011430 GGTTATCGTCTTGCCTGTTAACGTCTTGACGAAGATCTGCAT 1011471
Score = 172 bits (190), Expect = 1e-37
Identities = 172/223 (77%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| |||| | ||| || ||||||||||| || || || ||||||||||| | || ||
Sbjct 1010338 TCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGT 1010397
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||||||| || || || |||||||| |||||||||||||| ||||| || ||
Sbjct 1010398 GCGCCCATCTTCGAGTTGTTTTCCAGCGAAGATCAGTCGTTGTTGGTCCGGAGGTATTCC 1010457
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||| ||||| || |||||| ||||| || || || ||| || || || ||
Sbjct 1010458 CTCTTTGTCCTGAATCTTGGCCTTGACATTCTCGATCGTATCGGAAGCCTCAACCTCGAG 1010517
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| | |||||| |||||||| || || || || | ||||||
Sbjct 1010518 GGTTATCGTCTTGCCTGTCAATGTCTTGACAAAAATCTGCATT 1010560
Score = 150 bits (166), Expect = 4e-31
Identities = 160/211 (76%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || ||||||||||| || || || ||||||||||| | || || | ||||| ||
Sbjct 1010578 AACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGTCCATCCTC 1010637
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || || ||||| | ||||||||| || ||||| || || |||||||| ||
Sbjct 1010638 CAGCTGCTTTCCGGCAAAGATTAATCGTTGTTGATCCGGAGGTATTCCCTCTTTGTCCTG 1010697
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|||||| |||||| |||||||| || || ||| || ||||| | || | |||||
Sbjct 1010698 AATTTTGGCCTTGACATTCTCAATCGTATCAGAAGCCTCGACTTCCAATGTGATAGTCTT 1010757
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| ||||| ||||| || || | ||||||
Sbjct 1010758 CCCAGTCAACGTTTTCACAAAAATCTGCATT 1010788
Score = 129 bits (142), Expect = 1e-24
Identities = 155/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || ||||| || ||||| || || || || ||||| | ||| || | ||||||||
Sbjct 1009894 AACGAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCAGAAAGTGTGCGTCCATCTTC 1009953
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
| |||||| || |||||||| | || ||| ||||| || ||||| ||||||||||||||
Sbjct 1009954 TAACTGCTTTCCAGCGAAGATCAATCTTTGCTGGTCCGGTGGAATTCCTTCTTTGTCTTG 1010013
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|||||| || || || || ||||| || || || ||||| | || | |||||
Sbjct 1010014 AATTTTAGCTTTCACATTTTCGATGGTATCGGACGCCTCGACTTCCAATGTGATAGTCTT 1010073
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| |||| ||| || || || | ||||||
Sbjct 1010074 CCCAGTCAGAGTCTTAACAAAAATCTGCATT 1010104
>seq21718
Length=958615
Score = 118 bits (130), Expect = 2e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010
|||| ||||| || ||||||| ||| || | ||||| || | ||||| || || ||||
Sbjct 51081 CTTTCTGAATGTTATAATCGGAAAGGGTGCGTCCATCCTCCAATTGCTTTCCAGCAAAGA 51140
Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070
| | || ||||| || || || || || |||||||||||||| ||| || || ||||
Sbjct 51141 TCAAACGCTGTTGATCGGGTGGGATTCCCTCTTTGTCTTGAATCTTTGCTTTCACATTCT 51200
Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130
| || ||||| ||| || || || ||||||| ||| || || |||| ||||| ||||
Sbjct 51201 CGATAGTGTCGGAAGCCTCTACCTCGAGGGTAATCGTTTTACCCGTCAGGGTTTTCACGA 51260
Query 195131 ACACTTGCAT 195140
| | |||||
Sbjct 51261 ATATCTGCAT 51270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108762764097656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |