Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq12473 120 2e-21
seq16708 116 3e-20
>seq12473
Length=36767
Score = 120 bits (132), Expect = 2e-21
Identities = 110/139 (79%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| ||||| ||||| || |||||||| || || |||||| | || ||||| ||||| |
Sbjct 22227 ATGCTGTAATTACTGTCCCTGCATATTTCAACGATTCACAAAGACAGGCTACCAAAGACG 22168
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| | ||||| || |||||||| ||| | | || |||||||| || |||||||| |
Sbjct 22167 CTGGTCAAATTGCCGGTCTTAATGTACTTAGAGTAATTAATGAACCGACGGCTGCTGCCC 22108
Query 550518 TTGCATATGGACTTGATAA 550536
||||||||||| | || ||
Sbjct 22107 TTGCATATGGAATGGACAA 22089
>seq16708
Length=1145218
Score = 116 bits (128), Expect = 3e-20
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|| |||||||||||||| || || |||||| ||||||||||||| || || | |
Sbjct 1010798 AGGCGGAGTACAAGATGCAGAGTGGATTCTTTTTGTATATTGTAATCAGAGAGTGTGCGT 1010857
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||| ||||||||||| || || || |||| ||| || || |||||||||||||||
Sbjct 1010858 CCATCTTCGAGTTGTTTTCCAGCGAAGATCAGTCGTTGTTGGTCCGGAGGAATTCCTTCT 1010917
Query 563377 TTATCTTGAATTTT 563390
|| |||||||| ||
Sbjct 1010918 TTGTCTTGAATCTT 1010931
Score = 111 bits (122), Expect = 1e-18
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322
|| || | |||||| ||| |||||| ||| |||||||||| |||||||| | |||
Sbjct 654742 AGGACCAAATGAAGAGTAGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGTCCATCC 654801
Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382
|| ||||| || || || || || | | |||||||||||||||||||| || |||||
Sbjct 654802 TCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTATCC 654861
Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGT 563441
|| ||||| ||| || || || ||||| | | || ||| || || | |||
Sbjct 654862 TGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGAC-TTCCAGGGTGATAGT 654920
Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| || || ||||| || |||||||| |||||
Sbjct 654921 TTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654953
Score = 109 bits (120), Expect = 4e-18
Identities = 160/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
||||||||| || ||||||||||| ||| | ||| || || ||||||| || ||
Sbjct 1009885 GAGACGGAGAACGAGATGAAGGGTCGACTCCTTCTGG--ATGTTATAATCAGAAAGTGTG 1009942
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| | |||||| | || ||||| || || || | ||||||||| || || |||||||||
Sbjct 1009943 CGTCCATCTTCTAACTGCTTTCCAGCGAAGATCAATCTTTGCTGGTCCGGTGGAATTCCT 1010002
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432
||||| ||||||||||| ||| || || || ||||| | | || ||| |
Sbjct 1010003 TCTTTGTCTTGAATTTTAGCTTTCACATTTTCGATGGTATCGGACGCCTCGAC-TTCCAA 1010061
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | ||| || ||||| ||||| ||||| ||||| |||||
Sbjct 1010062 TGTGATAGTCTTCCCAGTCAGAGTCTTAACAAAAATCTGCAT 1010103
Score = 105 bits (116), Expect = 5e-17
Identities = 156/218 (72%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319
|| || || |||||||| || ||| || ||||||||||||| || || | | |
Sbjct 1011029 CGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGTCCA 1011088
Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379
||||| ||||||||||| || || || | || ||| || || |||||||||||||||||
Sbjct 1011089 TCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCTTCTTTG 1011148
Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATTCGAGAGTA 563436
|| |||||||| || || |||||| ||||| || | | || ||||| ||
Sbjct 1011149 TCCTGAATTTTGGCCTTGACGTTCTCAATCGTATCGGAAGCCTCA--AC-CTCGAGGGTT 1011205
Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| || || ||||| | ||| || || ||||| |||||
Sbjct 1011206 ATCGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCAT 1011243
Score = 102 bits (112), Expect = 7e-16
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322
|| || | |||||| ||| || || ||| |||||||||| |||||||| | |||
Sbjct 654286 AGGACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGATAGAGTTCGTCCATCC 654345
Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382
|| ||||| || || || || || | | |||||||||||||||||||| || |||||
Sbjct 654346 TCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTATCC 654405
Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGT 563441
|| ||||| ||| || || || ||||| | | || ||| || || | |||
Sbjct 654406 TGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGAC-TTCCAGGGTGATAGT 654464
Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| || || ||||| || |||||||| |||||
Sbjct 654465 TTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654497
Score = 102 bits (112), Expect = 7e-16
Identities = 107/139 (77%), Gaps = 4/139 (3%)
Strand=Plus/Plus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311
|| || || || || ||||||||||| ||| | | ||| || || ||||| | || |
Sbjct 1010111 CTCAGTCGTAGAACCAGATGAAGGGTCGACTCTTTCTGG--ATGTTATAATCGGAAAGCG 1010168
Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371
||||| |||||| ||||||||||| || || || | || ||| || || ||||||||||
Sbjct 1010169 TTCTTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTC 1010228
Query 563372 CTTCTTTATCTTGAATTTT 563390
||||||| || ||||||||
Sbjct 1010229 CTTCTTTGTCCTGAATTTT 1010247
Score = 102 bits (112), Expect = 7e-16
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
|| || || || || |||||||| || ||| || ||||||||||||| || ||
Sbjct 1011251 CTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTG 1011310
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| | |||||| ||||||||||| || || || | || ||| || || ||||||||||||
Sbjct 1011311 CGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCT 1011370
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414
||||| || |||||||| || || |||||| |||||
Sbjct 1011371 TCTTTGTCCTGAATTTTGGCCTTGACGTTCTCAATCGTATC 1011411
Score = 98.7 bits (108), Expect = 8e-15
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319
|| || || |||||||| || ||| || ||||||||||||| || || | | |
Sbjct 1010573 CGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGTCCA 1010632
Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379
|| || || || ||||||||||| || | || ||| ||||| ||||| ||||| |||||
Sbjct 1010633 TCCTCCAGCTGCTTTCCGGCAAAGATTAATCGTTGTTGATCCGGAGGTATTCCCTCTTTG 1010692
Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAAC 563438
|| |||||||| || || |||||| ||||||| | || ||| | || |
Sbjct 1010693 TCCTGAATTTTGGCCTTGACATTCTCAATCGTATCAGAAGCCTCGAC-TTCCAATGTGAT 1010751
Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| || ||||| | ||||| || ||||| |||||
Sbjct 1010752 AGTCTTCCCAGTCAACGTTTTCACAAAAATCTGCAT 1010787
Score = 96.9 bits (106), Expect = 3e-14
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 563263 AGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAAT 563320
|| || |||||||| || ||| ||||| || |||||||||| |||||||| | ||
Sbjct 654514 AGGACCAGATGAAGCGTGGACTCCTTTTGG--ATGTTGTAATCAGATAGAGTTCGTCCAT 654571
Query 563321 CTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTAT 563380
| || | || || || || || || | | |||||||||||||||||||| || || |
Sbjct 654572 CCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGT 654631
Query 563381 CTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACA 563439
| || ||||| ||| || ||| || || |||| | | | | ||| || || |
Sbjct 654632 CCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAG-GCTTCGACTTCCAGGGTGATG 654690
Query 563440 GTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||||| || || ||||| || |||||||| |||||
Sbjct 654691 GTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654725
Score = 91.5 bits (100), Expect = 1e-12
Identities = 152/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 563263 AGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAAT 563320
|| || |||||||| || ||| ||||| || |||||||||| |||||||| | ||
Sbjct 653830 AGGACCAGATGAAGCGTGGACTCCTTTTGG--ATGTTGTAATCAGATAGAGTTCGTCCAT 653887
Query 563321 CTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTAT 563380
| || | || || || || || || | | |||||||||||||||||||| || || |
Sbjct 653888 CCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGT 653947
Query 563381 CTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACA 563439
| || ||||| ||| || ||| || || |||| | | | | ||| | || |
Sbjct 653948 CCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAG-GCTTCGACTTCCAAGGTGATG 654006
Query 563440 GTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||||| || || ||||| || |||||||| |||||
Sbjct 654007 GTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654041
Score = 86.0 bits (94), Expect = 5e-11
Identities = 98/130 (75%), Gaps = 4/130 (3%)
Strand=Plus/Plus
Query 563263 AGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAAT 563320
|| || |||||||| || ||| ||||| || |||||||||| ||||| | | ||
Sbjct 654970 AGGACCAGATGAAGCGTGGACTCCTTTTGG--ATGTTGTAATCAGAGAGAGTACGTCCAT 655027
Query 563321 CTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTAT 563380
| || ||||| || || || || || | | ||||||||||||||||||||||| ||||
Sbjct 655028 CCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCTTCCTTAT 655087
Query 563381 CTTGAATTTT 563390
| || |||||
Sbjct 655088 CCTGGATTTT 655097
Score = 86.0 bits (94), Expect = 5e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
|| || || || || |||||||| || ||| || ||||||||||||| || ||
Sbjct 1010339 CTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTG 1010398
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| |||||| ||||||||||| || || || |||| ||| || || ||||| |||||
Sbjct 1010399 CGCCCATCTTCGAGTTGTTTTCCAGCGAAGATCAGTCGTTGTTGGTCCGGAGGTATTCCC 1010458
Query 563374 TCTTTATCTTGAATTTT 563390
||||| || ||||| ||
Sbjct 1010459 TCTTTGTCCTGAATCTT 1010475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4026621736098320
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