Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq10258 98.7 3e-16 >seq10258 Length=339 Score = 98.7 bits (108), Expect = 3e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 45569 CGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGAC 45628 ||| |||| |||||||| || | |||||||||||||||||| | || ||||| ||| Sbjct 22 CGCGCCGATAAGCGTCCCGTAAACTCCGACCTGCGCGAGTCCGGTTCTATCGAGCAGGAC 81 Query 45629 GCCGACATCGTCATGTTCGTGTACCGCGATGAAGTCTATTTCCCGAACAGCGACAGGAAG 45688 ||||| | ||||||| | ||||| ||||| |||||| | ||| ||||| | ||| Sbjct 82 GCCGATCTGATCATGTTTATCTACCGTGATGAGGTCTATCACGAGAATAGCGATATGAAA 141 Query 45689 GGTATCGGCGAAAT 45702 ||||||| ||||| Sbjct 142 GGTATCGCTGAAAT 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172651461366176