Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_018088.1
Length=104936
Score E
Sequences producing significant alignments: (Bits) Value
seq12851 140 2e-28
>seq12851
Length=316
Score = 140 bits (154), Expect = 2e-28
Identities = 214/305 (70%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 71236 CTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTATGTATCCAAACGTGCAGGT 71295
|| || || ||||| || | || || | ||||| || ||||||||| | || || ||
Sbjct 1 CTTGACTCCATTAACGCTACCTCCAGCGCGATTGTAAAATATGTATCCCAGCGCGCCGGG 60
Query 71296 ATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCTATACGCAATGGTGAAGCA 71355
|| || ||||||| ||| || || || || || || || || ||| || |||||
Sbjct 61 ATAGGCATCAATGCCGGCCGTATCCGCGCGTTGGGGAGCCCGATTCGCGGCGGCGAAGCT 120
Query 71356 GTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACAGCAGTCAAATCTTGCTCT 71415
| ||||| |||| || || |||| || |||||||| || || |||||||| || |||
Sbjct 121 TTCCATACCGGTTGTATTCCGTTCTATAAACATTTCCAGACCGCGGTCAAATCCTGTTCT 180
Query 71416 CAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCTATGTGGCATTTAGAAGTT 71475
||||| ||| | || || || || || || |||||| |||||||||||||| || |
Sbjct 181 CAGGGCGGCGTGCGCGGCGGCGCGGCCACGTTGTTCTATCCTATGTGGCATTTGGAGATC 240
Query 71476 GAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGAAGATAACCGTGTACGTCATTTA 71535
||||| || | || | ||||| || || || |||| ||||| || || ||| |
Sbjct 241 GAAAGTCTGCTGGTGCTAAAAAACAATCGCGGCGTGGAAGCCAACCGGGTGCGGCATATG 300
Query 71536 GACTA 71540
|| ||
Sbjct 301 GATTA 305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335463527171656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |