Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_019417.1 Length=59203 Score E Sequences producing significant alignments: (Bits) Value seq30442 275 2e-69 >seq30442 Length=231 Score = 275 bits (304), Expect = 2e-69 Identities = 199/230 (87%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 11167 CTCGCCGACATCACGCCGAGCGAACTGGCCGCGCTACGTGAAGCGCTGGATAATAAGAGC 11226 |||||| ||||||||||| ||||||||||||| ||||| ||||||||||||| |||| | Sbjct 1 CTCGCCAACATCACGCCGGGCGAACTGGCCGCACTACGCGAAGCGCTGGATACCAAGACC 60 Query 11227 CGCAGCCTCGATACCGCAGAGAGCGCCGTCACCAGTCTGCAAATCCAGTTATCCGAGGCC 11286 |||||||||||||| || || ||||| ||||||||||||||||||||||| |||| ||| Sbjct 61 CGCAGCCTCGATACGGCGGAAAGCGCTGTCACCAGTCTGCAAATCCAGTTGGCCGAAGCC 120 Query 11287 CACCGCCGTCACGCCGAAGATAACACCGAGCACGACCGGGAAACGACTAAGCTGCGCGCT 11346 || ||||| ||||| || |||||||||||||||||| |||| | || ||||||||||| Sbjct 121 CATCGCCGACACGCTGACGATAACACCGAGCACGACAGGGAGATCACAAAGCTGCGCGCC 180 Query 11347 ACGATCAAATCGATGCAGAATGACGTACGTTACACCCGGAAGTCCGCGTC 11396 ||| | || |||||||||||| ||||||| |||||||| |||||||||| Sbjct 181 ACGGTTAAGTCGATGCAGAATAACGTACGGTACACCCGACAGTCCGCGTC 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189214309482640