Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq12851 127 2e-24 >seq12851 Length=316 Score = 127 bits (140), Expect = 2e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 95056 CATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAATCATGTTCACAA 95115 ||||||||| |||||| |||| |||||||||||||| || || ||||| ||||| || Sbjct 124 CATACCGGTTGTATTCCGTTCTATAAACATTTCCAGACCGCGGTCAAATCCTGTTCTCAG 183 Query 95116 GGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGAA 95175 || || | || |||||||| || || | |||||||| ||||||||||| | ||| Sbjct 184 GGCGGCGTGCGCGGCGGCGCGGCCACGTTGTTCTATCCTATGTGGCATTTGGAGATCGAA 243 Query 95176 AATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGATGAGAACCGTATTCGCCATATGGAC 95235 | |||||| || || |||||||| || || || | ||||| | || |||||||| Sbjct 244 AGTCTGCTGGTGCTAAAAAACAATCGCGGCGTGGAAGCCAACCGGGTGCGGCATATGGAT 303 Query 95236 TACGG 95240 ||||| Sbjct 304 TACGG 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537343330449280