Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq14305 86.0 2e-12 >seq14305 Length=304 Score = 86.0 bits (94), Expect = 2e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 4173 GCCACCAAGCATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCTATC 4232 ||| || |||||||||||||| || || || || | |||||||| || | | ||| Sbjct 156 GCCCCCGAGCATTTGCATGGTGCCGCCCACATTGACCACAACTTCGGTGGTATAGCGATC 215 Query 4233 CTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGA 4292 ||| ||||| || |||||||| || | ||| ||| ||| || | ||| || | || Sbjct 216 CTGACCGCTCTGGTCCTGCCACTTGCGGGTCTGCAGCGATCCCTCGATATACACTTGGGA 275 Query 4293 GCCTTTTCGCAGATATTCGC 4312 |||||| ||||||||||||| Sbjct 276 GCCTTTACGCAGATATTCGC 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126669489900928