Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_019503.1 Length=166499 Score E Sequences producing significant alignments: (Bits) Value seq12851 114 1e-20 >seq12851 Length=316 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 138501 TGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 138560 || ||||| ||||||||||| || | ||||| |||| || || || ||||| | Sbjct 314 TGTACGCCGTAATCCATATGCCGCACCCGGTTGGCTTCCACGCCGCGATTGTTTTTTAGC 255 Query 138561 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138620 || || ||| |||| | ||||||||||| |||||||| | || || |||||||| Sbjct 254 ACCAGCAGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGCCG 195 Query 138621 CGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138680 || | || ||||| ||||| ||||| || || ||||| |||||||| | || |||||| Sbjct 194 CGCACGCCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAATA 135 Query 138681 ACACCAGTATG 138691 ||| ||||| Sbjct 134 CAACCGGTATG 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532332100051520