Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_019538.1
Length=231743
Score E
Sequences producing significant alignments: (Bits) Value
seq16755 100 4e-16
seq12851 87.8 3e-12
>seq16755
Length=287
Score = 100 bits (110), Expect = 4e-16
Identities = 72/82 (88%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 198933 TTGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCG 198992
|||| ||||||||||||| |||||||||| ||||||||||||| || ||| |||||||
Sbjct 170 TTGGTCCCTTAGCTCAGT-GGTTAGAGCAAGCGACTCATAATCGCTTAGTCGCTGGTTCA 112
Query 198993 AGTCCAGTAGGGGCCACCAGAT 199014
||||||| ||||||||||| ||
Sbjct 111 AGTCCAGCAGGGGCCACCATAT 90
>seq12851
Length=316
Score = 87.8 bits (96), Expect = 3e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 119952 ACAAGCAGTTTCTCAACCTCCAAATGCCACATAGGGTAATTCAGAGTAGCAGAGCCGCCA 120011
|| ||||| | || | |||||||||||||||||| || || || || | ||||||
Sbjct 254 ACCAGCAGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGCCG 195
Query 120012 CGTAGAGCACCTTGCGAACAGCTCTTAACCGCAGTATGGAAGTGCTTGTAGAATGGGATT 120071
|| | | || || |||||| || ||||| || ||||| || || ||||| || ||
Sbjct 194 CGCACGCCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAATA 135
Query 120072 ACGCCGGTATGGGTTGCTTCGCCGTTGCGAATTGGTGAACCCTCCGCACGAATAGCACCA 120131
||||||||| ||||||||| |||||| || ||| ||| || ||| ||
Sbjct 134 CAACCGGTATGGAAAGCTTCGCCGCCGCGAATCGGGCTCCCCAACGCGCGGATACGGCCG 75
Query 120132 GCATTAATACCAATACCAGCACGTTG 120157
||||| || || || || || || ||
Sbjct 74 GCATTGATGCCTATCCCGGCGCGCTG 49
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740980929707840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |