Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq50200 116 1e-21
>seq50200
Length=540
Score = 116 bits (128), Expect = 1e-21
Identities = 235/349 (67%), Gaps = 0/349 (0%)
Strand=Plus/Minus
Query 45884 TTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGAT 45943
||||||||||| || || || ||| ||||| || | | ||||| || ||||
Sbjct 506 TTTCAGTTTTATGTTGCCAACGGCACCTTGTCCTGTCAGCTCTATCAGCGCTCATGCGAT 447
Query 45944 ACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCC 46003
| || || || |||||||||| ||||| |||||||| || || ||||||| | ||
Sbjct 446 ATTTTCCTCGGCCTGCCGTTTAATATCGCCAGCTATGCCTTGCTGGTACATATGCTGGCG 387
Query 46004 CAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTAC 46063
|| || ||||| | | ||| | || || | | ||||| ||||| |||| | |||
Sbjct 386 CAGCAGTGCGATTTGCAGGTCTGTGATTTCGTCTGGACCGGAGGCGATACCCATCTCTAC 327
Query 46064 AAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAG 46123
| || ||| || | || ||| | |||||||| || || || || | ||||||||| ||
Sbjct 326 AGTAACCATTTGCAGCAGGCGGACCTGCAGCTAACCCGTGATCCTCTGCCGCTGCCGCAG 267
Query 46124 CTCGTGATCAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGAGGATTTTGAATTT 46183
|| |||| || || ||| || | | | ||||| | ||||||||||| |
Sbjct 266 CTGCTGATTAAGCGCCGTCCGGCGACATTGCTCGACTACCGTTTTGAGGATTTTGAGCTG 207
Query 46184 GTCGGCTATGACCCGCACCCGGCGATTAAGGCTCCTGTATCCGTTTGAG 46232
||||| || || ||||| || || || || || || | |||| ||
Sbjct 206 ACGGGCTACGATCCCCACCCAGCAATCAAAGCACCGGTGGCAGTTTAAG 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157655671673552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |