Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq16755 89.7 6e-13 >seq16755 Length=287 Score = 89.7 bits (98), Expect = 6e-13 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 74895 CATAATTTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGC 74954 || ||| ||||||||| | ||||| ||||||||| ||| || ||||||||||||| ||| Sbjct 86 CAAAATATGGTGGCCCCTGCTGGACTTGAACCAGCGACTAAGCGATTATGAGTCGCTTGC 145 Query 74955 TCTAACCATCTGAGCTAAAGGGCC 74978 |||||||| ||||||||| || || Sbjct 146 TCTAACCA-CTGAGCTAAGGGACC 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539719427568320