Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq50200 141 1e-28
>seq50200
Length=540
Score = 141 bits (156), Expect = 1e-28
Identities = 222/315 (70%), Gaps = 2/315 (1%)
Strand=Plus/Minus
Query 123071 TTGTCCTGTCAGCTGTATCAGCGCAG-TGCTGACATGTTCCTAGGCGTACCGTTTAACAT 123129
|||||||||||||| ||||||||| ||| || || ||||| ||| | |||||||| ||
Sbjct 479 TTGTCCTGTCAGCTCTATCAGCGCTCATGC-GATATTTTCCTCGGCCTGCCGTTTAATAT 421
Query 123130 TGCCTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGA 123189
||| || || | ||| |||| ||| | || |||||| | || || || ||||
Sbjct 420 CGCCAGCTATGCCTTGCTGGTACATATGCTGGCGCAGCAGTGCGATTTGCAGGTCTGTGA 361
Query 123190 CTTCGTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTT 123249
||||| ||||| || || ||| ||||| ||| ||||| || ||||||| || |
Sbjct 360 TTTCGTCTGGACCGGAGGCGATACCCATCTCTACAGTAACCATTTGCAGCAGGCGGACCT 301
Query 123250 GCAGTTAACTCGCGAACCTCATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATTC 123309
|||| |||| || || |||| ||| | || || |||| |||||| || ||||||| |
Sbjct 300 GCAGCTAACCCGTGATCCTCTGCCGCTGCCGCAGCTGCTGATTAAGCGCCGTCCGGCGAC 241
Query 123310 TATCTTCGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACGCTAT 123369
| ||||||| ||||| ||||| || || || ||||| | || || ||
Sbjct 240 ATTGCTCGACTACCGTTTTGAGGATTTTGAGCTGACGGGCTACGATCCCCACCCAGCAAT 181
Query 123370 TAAGGCACCGGTGGC 123384
|| |||||||||||
Sbjct 180 CAAAGCACCGGTGGC 166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777140458812800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |