Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq16755 84.2 4e-12 >seq16755 Length=287 Score = 84.2 bits (92), Expect = 4e-12 Identities = 59/65 (91%), Gaps = 3/65 (5%) Strand=Plus/Minus Query 20132 CTCATAATCGCTTGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCAGATTTTAGCTGCTAA 20191 ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||| Sbjct 137 CTCATAATCGCTTAGTCGCTGGTTCAAGTCCAGCAGGGGCCACCATATTTT-GCT--TAA 81 Query 20192 ATCAG 20196 | ||| Sbjct 80 AGCAG 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94426463310816