Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq18886 84.2 3e-11
>seq18886
Length=112513
Score = 84.2 bits (92), Expect = 3e-11
Identities = 162/239 (68%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|| || |||||||| | ||||| |||||||| ||||| || |||||||| || ||||||
Sbjct 87539 ACTCCTATAGGACCCATCCCAGGTCCTCCACCGCCATGAGGTATACAGAAAGTTTTATGT 87480
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
||||| | ||| | || || || || || | || || || || ||||||
Sbjct 87479 AAATTCAAATGCGAAACGTCGCTGCCGTAATCGCCAGGACGGCAAAGGCCAACTTGTGCA 87420
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || || ||||| | |||||| || || || ||| ||||| ||| |||||
Sbjct 87419 TTCATGTTAGCTCCATCTAAATATACTTGGCCCCCCGCGTCGTGAACCATCGCGCATATG 87360
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421
| | || || || || || || | ||||| || || || ||||| | ||| ||
Sbjct 87359 TCGCCTATCGTTTCCTCGAAAACGCCGTTCGTCGACGGGTACGTTATCATTAAACAAGA 87301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578632415111360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |