Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq50200 118 2e-21 >seq50200 Length=540 Score = 118 bits (130), Expect = 2e-21 Identities = 221/317 (70%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 99588 TTGTCTTGTCAGCTCTATCAGCG-TAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACAT 99646 ||||| ||||||||||||||||| | ||| || | ||| | || |||||||||| || Sbjct 479 TTGTCCTGTCAGCTCTATCAGCGCTCATGC-GATATTTTCCTCGGCCTGCCGTTTAATAT 421 Query 99647 CGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAG-GCGAATATGGCGGTGGGCG 99705 ||| ||||| | ||| | || ||| | || |||||| |||| | || ||| | | Sbjct 420 CGCCAGCTATGCCTTGCTGGTACATATGCTGGCGCAGCAGTGCGATT-TGCAGGTCTGTG 362 Query 99706 ATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACGTA 99765 |||||||||||||||| || ||| ||||| || ||||||| || | ||||| | Sbjct 361 ATTTCGTCTGGACCGGAGGCGATACCCATCTCTACAGTAACCATTTGCAGCAGGC-GGAC 303 Query 99766 CT-CAGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAACGTAAGCCGGAC 99824 || ||| || ||| ||| | || |||| ||||| | || || || |||| Sbjct 302 CTGCAGCTAACCCGTGATCCTCTGCCGCTGCCGCAGCTGCTGATTAAGCGCCGTCCGGCG 243 Query 99825 TCTATCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGACCCACACCCGGCT 99884 | | ||||||| || || |||||||| | |||||||| || ||||| || Sbjct 242 ACATTGCTCGACTACCGTTTTGAGGATTTTGAGCTGACGGGCTACGATCCCCACCCAGCA 183 Query 99885 ATTAAAGCACCGGTGGC 99901 || |||||||||||||| Sbjct 182 ATCAAAGCACCGGTGGC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716183813878720