Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_021779.1 Length=59746 Score E Sequences producing significant alignments: (Bits) Value seq30442 246 1e-60 >seq30442 Length=231 Score = 246 bits (272), Expect = 1e-60 Identities = 184/216 (85%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 48459 GGTGTACCGGGCGTCGTCCTGCATCGACTTAATCGTGGCGCGCAACTTGGTCATTTCCCG 48518 ||||||||| ||| | |||||||||||||| ||||||||||| ||| || || |||| Sbjct 216 GGTGTACCGTACGTTATTCTGCATCGACTTAACCGTGGCGCGCAGCTTTGTGATCTCCCT 157 Query 48519 GTCGTGCTCGGTGTTATCTTCGGCGTGACGGCGGTGGGCCTCGGATAACTGGATTTGCAG 48578 |||||||||||||||||| || ||||| ||||| ||||| |||| |||||||||||||| Sbjct 156 GTCGTGCTCGGTGTTATCGTCAGCGTGTCGGCGATGGGCTTCGGCCAACTGGATTTGCAG 97 Query 48579 ACTGGTGACAGCGCTTTCAGCCGTATCGAGACGGCGTCCTTTGTCTTCCAGCGCTTCTCG 48638 |||||||||||||||||| ||||||||||| | ||| ||| ||||||||||| || Sbjct 96 ACTGGTGACAGCGCTTTCCGCCGTATCGAGGCTGCGGGTCTTGGTATCCAGCGCTTCGCG 37 Query 48639 CAGCGCGGCCAGTTCGCCCGGCGTGATGTCGGCGAG 48674 || ||||||||||||||||||||||||| |||||| Sbjct 36 TAGTGCGGCCAGTTCGCCCGGCGTGATGTTGGCGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190950866062528