Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_021780.1 Length=59454 Score E Sequences producing significant alignments: (Bits) Value seq30442 347 5e-91 >seq30442 Length=231 Score = 347 bits (384), Expect = 5e-91 Identities = 215/230 (93%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 11005 CTCGCCGACATCACGCCGGGCGAACTGGCCGCGCTACGCGAAGCGCTGGACACCAAGACC 11064 |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1 CTCGCCAACATCACGCCGGGCGAACTGGCCGCACTACGCGAAGCGCTGGATACCAAGACC 60 Query 11065 CGCAGCCTCGATACGGCTGAAAGCGCTGTCACCAGCCTGCAAATCCAGTTGGCCGAAGCC 11124 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 CGCAGCCTCGATACGGCGGAAAGCGCTGTCACCAGTCTGCAAATCCAGTTGGCCGAAGCC 120 Query 11125 CACCGCCGACACGCTGACGATAACACCGAGCACGACCGGGAGATCACAAAGCTGCGCGCC 11184 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 121 CATCGCCGACACGCTGACGATAACACCGAGCACGACAGGGAGATCACAAAGCTGCGCGCC 180 Query 11185 ACGGTTAAGTCGCTACAGAACAGCGTACGATATACCCGGCAGTCCGCATC 11234 |||||||||||| | ||||| | |||||| || ||||| |||||||| || Sbjct 181 ACGGTTAAGTCGATGCAGAATAACGTACGGTACACCCGACAGTCCGCGTC 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190017027165056