Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq16708 132 3e-26 seq21718 95.1 8e-15 >seq16708 Length=1145218 Score = 132 bits (146), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | |||||||||| |||| || ||||||||||||||| ||||||| Sbjct 654041 TTCCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCG 654100 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | | || |||| ||||| ||||| || ||||| |||| || ||||| || | | Sbjct 654101 ACAAAGTACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCAGGAG 654160 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | ||||||||||| | ||||| ||| || || || |||| ||| ||| || Sbjct 654161 GAATTCCCTCCTTGTCCTGGATTTTGGCTTTCAC--ATTCTCGATCGTGTCAGAGGCTTC 654218 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || | ||| ||||| || || ||||| |||||||| || |||||||| Sbjct 654219 GACTTCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654269 Score = 127 bits (140), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | ||||||||||| |||| ||| |||||| || ||||| || || | Sbjct 654497 TTCCTCCACGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAG 654556 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| | || |||| || | ||||| || |||||||||| || ||||| || | | Sbjct 654557 ATAGAGTTCGTCCATCCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 654616 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | ||||||||||| | ||||| ||| || || || |||| ||| ||| || Sbjct 654617 GAATTCCCTCCTTGTCCTGGATTTTGGCTTTCAC--ATTCTCGATCGTGTCAGAGGCTTC 654674 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || | ||| ||||| || || ||||| |||||||| || |||||||| Sbjct 654675 GACTTCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654725 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | ||||||||||| |||| ||| |||||| || ||||| || || | Sbjct 654953 TTCCTCCACGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAG 655012 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | || |||| || |||||||| || |||||||||| || ||||| || | | Sbjct 655013 AGAGAGTACGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 655072 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | ||||| ||| ||| | | |||| || || |||| Sbjct 655073 GAATTCCTTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTGTCTGAAGCTTCGA 655132 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||| ||||| || || ||||| ||||| ||||||||||||||| Sbjct 655133 CTTCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTGACAAAGATCTGCATG 655182 Score = 125 bits (138), Expect = 5e-24 Identities = 159/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||||||||| |||| ||| |||||| || ||||| || || ||||| | || || Sbjct 653827 CTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGATAGAGTTCGTCCA 653886 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || | ||||| || |||||||||| || ||||| || | || | ||||||||| Sbjct 653887 TCCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTG 653946 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTA 34940 || | ||||| ||| || || || |||| ||| ||| ||||| || | ||| | Sbjct 653947 TCCTGGATTTTGGCTTTCAC--ATTCTCGATCGTGTCAGAGGCTTCGACTTCCAAGGTGA 654004 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || ||||| |||||||| || |||||||| Sbjct 654005 TGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654041 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | |||||||||| |||| || ||||||||||||||| || || | Sbjct 654269 TTCCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAG 654328 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| | || |||| || |||||||| || |||||||||| || ||||| || | | Sbjct 654329 ATAGAGTTCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 654388 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | |||||||| || | ||||| ||| ||| | | |||| || || |||| Sbjct 654389 GAATTCCCTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGA 654448 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| || || || || ||||| |||||||| || |||||||| Sbjct 654449 CTTCCAGGGTGATAGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654497 Score = 118 bits (130), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | || ||||| |||| ||| |||||||| || || || || | Sbjct 1010331 TTCCGCCTCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAG 1010390 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || ||||| |||| || ||||| ||||| ||||||||||||||||| ||||| | | Sbjct 1010391 AGAGTGTGCGCCCATCTTCGAGTTGTTTTCCAGCGAAGATCAGTCGTTGTTGGTCCGGAG 1010450 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | ||||| ||||| | || || ||||| || || |||| || ||||| Sbjct 1010451 GTATTCCCTCTTTGTCCTGAATCTTGGCCTTGAC--ATTCTCGATCGTATCGGAAGCCTC 1010508 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | |||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1010509 AACCTCGAGGGTTATCGTCTTGCCTGTCAATGTCTTGACAAAAATCTGCAT 1010559 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | |||||||||| |||| || || ||||||||||| || || | Sbjct 654725 TTCCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGATTCTTTCTGAATGTTGTAATCAG 654784 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| | || |||| || |||||||| || |||||||||| || ||||| || | | Sbjct 654785 ATAGAGTTCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 654844 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | |||||||| || | ||||| ||| ||| | | |||| || || |||| Sbjct 654845 GAATTCCCTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGA 654904 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| || || || || ||||| |||||||| || |||||||| Sbjct 654905 CTTCCAGGGTGATAGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCAT 654953 Score = 116 bits (128), Expect = 2e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | || ||||| |||| ||| |||||||| || || || || | Sbjct 1011243 TTCCGCCTCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAG 1011302 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| || ||||| ||||| |||||||||| |||||| ||||| | | Sbjct 1011303 AGAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAG 1011362 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | ||||| |||||| | |||| || ||||| | Sbjct 1011363 GAATTCCTTCTTTGTCCTGAATTTTGGCCTTGACGTTCTCAATCGTATCGGAAGCCTCAA 1011422 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | || | |||||| ||||| || || | ||||| || |||||||||||||| Sbjct 1011423 CCTCGAGGGTTATCGTCTTGCCTGTTAACGTCTTGACGAAGATCTGCATGAT 1011474 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | || ||||| |||| ||| ||| ||||| |||||||| || | Sbjct 1010103 TTCCGCCTCTCAGTCGTAGAACCAGATGAAGGGTCGACTCTTTCTGGATGTTATAATCGG 1010162 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || ||||| ||||| |||||||||| |||||| ||||| | | Sbjct 1010163 AAAGCGTTCTTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAG 1010222 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || || ||||| | ||||| ||||| || || |||| || ||||| Sbjct 1010223 GAATTCCTTCTTTGTCCTGAATTTTGGCCTTGAC--ATTCTCGATCGTGTCGGAAGCCTC 1010280 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | |||||| || || || || | ||||||||||| |||||||| Sbjct 1010281 AACCTCGAGGGTTATCGTTTTGCCTGTCAACGTCTTTACAAAAATCTGCAT 1010331 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || ||||| | || ||||| |||| ||| |||||||| || || || || | Sbjct 1010559 TTCCACCTCTCAATCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAG 1010618 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| ||||| ||||||||||| ||||| | |||||| || || | | Sbjct 1010619 AGAGTGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAGATTAATCGTTGTTGATCCGGAG 1010678 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | ||||| ||||| | ||||| ||||| || || |||| ||| ||||| Sbjct 1010679 GTATTCCCTCTTTGTCCTGAATTTTGGCCTTGAC--ATTCTCAATCGTATCAGAAGCCTC 1010736 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || | || || ||||| || || | || || ||||| |||||||| Sbjct 1010737 GACTTCCAATGTGATAGTCTTCCCAGTCAACGTTTTCACAAAAATCTGCAT 1010787 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || || || || || || || |||| |||| || ||||| ||||| |||||| Sbjct 1010825 TCTTTTTGTATATTGTAATCAGAGAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCGAAG 1010884 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||||||||| ||||| | || | || || ||||| | || || |||||| | Sbjct 1010885 ATCAGTCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCTTGACGTTT 1010944 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || ||||| || || | |||||| ||||| || || | ||||| ||| Sbjct 1010945 TCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTCAACGTCTTGACA 1011004 Query 34967 AAGATCTGCAT 34977 || |||||||| Sbjct 1011005 AAAATCTGCAT 1011015 >seq21718 Length=958615 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 |||||||||||||| || || ||| |||| |||| |||| ||||||||| || |||||| Sbjct 51083 TTCTGAATGTTATAATCGGAAAGGGTGCGTCCATCCTCCAATTGCTTTCCAGCAAAGATC 51142 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 | || || || || | || | ||||| ||||| | || ||| ||| || || || Sbjct 51143 AAACGCTGTTGATCGGGTGGGATTCCCTCTTTGTCTTGAATCTTTGCTTTCAC--ATTCT 51200 Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 || | || ||||| || || | ||| || || || ||||| ||||| || || | Sbjct 51201 CGATAGTGTCGGAAGCCTCTACCTCGAGGGTAATCGTTTTACCCGTCAGGGTTTTCACGA 51260 Query 34968 AGATCTGCAT 34977 | |||||||| Sbjct 51261 ATATCTGCAT 51270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325492076341592