Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq3379 98.7 3e-16 >seq3379 Length=438 Score = 98.7 bits (108), Expect = 3e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 23585 ACACGACGCGGTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGG 23644 |||| |||||||||||||| || || ||||| ||||||||| |||||||| |||| Sbjct 1 ACACCACGCGGTGCCATTCCGTTTTCTCCTTTGTCTCGCCGGTTTGCTTGTCGCGCCAGC 60 Query 23645 TTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTT 23704 | ||||| |||||||| | |||||| || ||| | || || ||| ||||| |||| Sbjct 61 TCTCCGAAGTGGCCAGCGTAATGTTGGCTACCGCACCACCATTAGGCATATAGCGGACTT 120 Query 23705 CCGGGTCATTACCCAGG 23721 |||| || | |||||| Sbjct 121 CCGGATCCTGGCCCAGG 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139199561134816