Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq11667 246 5e-60 >seq11667 Length=326 Score = 246 bits (272), Expect = 5e-60 Identities = 247/319 (77%), Gaps = 4/319 (1%) Strand=Plus/Plus Query 71371 TTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGATGTT 71430 || ||||||||||||||||||||| | || || |||||||| || |||||||| ||||| Sbjct 9 TTTGAAAAGCTGATTGAGAAACAATTGTCGTTTTTCTGGCGTCCGGAAGAGGTAGATGTG 68 Query 71431 TCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGTTTCT 71490 || | || || ||||| | |||| | |||| || || |||||||| ||||| || | Sbjct 69 TCTCGCGATCGCATCGATTATCAGGCGCTGCCGGAGCACGAAAAACATATCTTTATTAGT 128 Query 71491 AACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCCTTG 71550 ||||| ||||| || || |||||||| || || ||||| || ||||| || || || | Sbjct 129 AACCTCAAATATCAGACGCTGCTGGATTCAATCCAGGGCCGCAGCCCCAATGTTGCGCTA 188 Query 71551 CTGCCGATCTG--TTCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCTG 71608 |||| |||| ||| || ||||| || ||||||||| | |||||||||||||| |||| Sbjct 189 TTGCC--TCTGATTTCGATACCGGAGCTAGAAACCTGGGTGGAAACCTGGGCGTTTTCTG 246 Query 71609 AAACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTACTGACCCCTCCA 71668 |||| || || |||||||| || ||||| |||||||| |||||| | | || || || Sbjct 247 AAACCATACATTCGCGCTCCTATACCCATATCATCCGCAATATCGTCAACGATCCGTCGC 306 Query 71669 TCGTGTTTGATGACATCGT 71687 | ||||| || |||||||| Sbjct 307 TGGTGTTCGACGACATCGT 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 866792553880320