Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_023557.1
Length=271084
Score E
Sequences producing significant alignments: (Bits) Value
seq11667 246 5e-60
>seq11667
Length=326
Score = 246 bits (272), Expect = 5e-60
Identities = 247/319 (77%), Gaps = 4/319 (1%)
Strand=Plus/Plus
Query 71371 TTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGATGTT 71430
|| ||||||||||||||||||||| | || || |||||||| || |||||||| |||||
Sbjct 9 TTTGAAAAGCTGATTGAGAAACAATTGTCGTTTTTCTGGCGTCCGGAAGAGGTAGATGTG 68
Query 71431 TCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGTTTCT 71490
|| | || || ||||| | |||| | |||| || || |||||||| ||||| || |
Sbjct 69 TCTCGCGATCGCATCGATTATCAGGCGCTGCCGGAGCACGAAAAACATATCTTTATTAGT 128
Query 71491 AACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCCTTG 71550
||||| ||||| || || |||||||| || || ||||| || ||||| || || || |
Sbjct 129 AACCTCAAATATCAGACGCTGCTGGATTCAATCCAGGGCCGCAGCCCCAATGTTGCGCTA 188
Query 71551 CTGCCGATCTG--TTCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCTG 71608
|||| |||| ||| || ||||| || ||||||||| | |||||||||||||| ||||
Sbjct 189 TTGCC--TCTGATTTCGATACCGGAGCTAGAAACCTGGGTGGAAACCTGGGCGTTTTCTG 246
Query 71609 AAACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTACTGACCCCTCCA 71668
|||| || || |||||||| || ||||| |||||||| |||||| | | || || ||
Sbjct 247 AAACCATACATTCGCGCTCCTATACCCATATCATCCGCAATATCGTCAACGATCCGTCGC 306
Query 71669 TCGTGTTTGATGACATCGT 71687
| ||||| || ||||||||
Sbjct 307 TGGTGTTCGACGACATCGT 325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 866792553880320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |