Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq11667 161 1e-34 seq6113 84.2 2e-11 >seq11667 Length=326 Score = 161 bits (178), Expect = 1e-34 Identities = 227/316 (72%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 121985 GATGTCGTCAAAGACGATCGACGGGTCTGCCAGGATGTTGCGGATGATGTGGGTGTACGA 122044 ||||||||| || || | |||||| || | ||| ||||||||||| ||||| || || Sbjct 323 GATGTCGTCGAACACCAGCGACGGATCGTTGACGATATTGCGGATGATATGGGTATAGGA 264 Query 122045 ACGAGAGTGAATAGTCTCACTGAACGCCCAAGTCTCCACCCAAGTTTCCAGGGT-GGTGT 122103 || || || || || ||| |||||||| || |||||||| ||||| || ||| | Sbjct 263 GCGCGAATGTATGGTTTCAGAAAACGCCCAGGTTTCCACCCAGGTTTCTAGCTCCGGTAT 204 Query 122104 CGGATACGATCGGCAGAAGAACTGCGTTCGGGCCACGGCCCTGTACAGAGTCCAGAAGGA 122163 || | | | |||| || | | || |||| |||||||| | || ||||| || Sbjct 203 CGAAATC-AGAGGCAATAGCGCAACATTGGGGCTGCGGCCCTGGATTGAATCCAGCAGCG 145 Query 122164 TCTGATACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGAAGATTCATGTAGT 122223 ||||||| || ||||| || || ||||| || || ||||| ||||| || | || | Sbjct 144 TCTGATATTTGAGGTTACTAATAAAGATATGTTTTTCGTGCTCCGGCAGCGCCTGATAAT 85 Query 122224 CAATTCGGTCACGGGTCACGTTCACCTCTTCCGGACGCCAGAAGAATGCCAGTTGCTTTT 122283 | || || || || | ||| | |||||||||||||||||||| || | || ||| || | Sbjct 84 CGATGCGATCGCGAGACACATCTACCTCTTCCGGACGCCAGAAAAACGACAATTGTTTCT 25 Query 122284 CGATCAGCTTTTCGAA 122299 | ||||||||||| || Sbjct 24 CAATCAGCTTTTCAAA 9 >seq6113 Length=390 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 123431 GTAGGCAGGGCAATCTCCATGCACAGGTTGGACTGTTTCACCGGGGCCAGTTCTGGATTG 123490 |||||||| ||||| |||| ||||||||| ||||| | ||| |||| | | ||| Sbjct 318 GTAGGCAGTGCAATTTCCAGGCACAGGTTAGACTGGCGAATCGGCGCCATCGCAGCGTTG 259 Query 123491 AACGGGCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGTAGATGCGTCCTGTCTGACTG 123550 || ||||||| ||||||||| || | |||| || | |||||||| || || | | Sbjct 258 AATGGGCTGTGGGTGTTGCAATGATTGACGTTGTGCACATAGATGCGGCCGGTGGAAGCG 199 Query 123551 CGCTCCTGCAT 123561 ||||||||||| Sbjct 198 CGCTCCTGCAT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485721581195520