Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq49826 104 7e-17 >seq49826 Length=126732 Score = 104 bits (114), Expect = 7e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 46587 TTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGATTCGTTATTACCTTATGTT 46646 ||| | || ||||||||||||||||||||| ||||||||| || |||||| ||||| Sbjct 33887 TTTCTGGATGAAATACATCGTTTCAATAAAATGCAGCAAGATGTATTTTTACCTCATGTT 33828 Query 46647 GAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAATCCATTTTT 46696 ||| ||| || ||||| |||||||||||||||| ||||| || | ||| Sbjct 33827 GAATCTGGCACTATTACACTAATTGGTGCAACAACGGAAAACCCTTCTTT 33778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1590878997272064