Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq3379 105 2e-18 >seq3379 Length=438 Score = 105 bits (116), Expect = 2e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| |||||||| || || || ||||| || | || |||| || || ||||| || Sbjct 178 ATGGCCAGCAGAGGCGTTAATAAAGTGATTCTAGTCGGAAACCTGGGCCAGGATCCGGAA 119 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || |||||| | || | || || || || || ||||| || | || || || ||| Sbjct 118 GTCCGCTATATGCCTAATGGTGGTGCGGTAGCCAACATTACGCTGGCCACTTCGGAGAGC 59 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGT 38366 ||||| || ||||||||||| || |||| |||||||| || |||||||| || Sbjct 58 TGGCGCGACAAGCAAACCGGCGAGACAAAGGAGAAAACGGAATGGCACCGCGT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132819394694896