Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq16708 118 1e-21
>seq16708
Length=1145218
Score = 118 bits (130), Expect = 1e-21
Identities = 154/208 (74%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || ||||| || || || | | | ||||| ||
Sbjct 654064 AAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGACAAAGTACGTCCA-TCCTCCAG 654122
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | |||||||| || ||||| || || |||||||| |||
Sbjct 654123 CTGCTTGCCAGCGAAAATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGGAT 654182
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || || | | ||| | |||||| | || || || || | ||||| |||||| |
Sbjct 654183 -TTTGGCTTTCACATTCTCGATCGTGTCAGAGGCTTCGACTTCCAGGGTGATGGTTTTCC 654241
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| |||||||||||||||||
Sbjct 654242 CTGTGAGAGTCTTTACGAAAATCTGCAT 654269
Score = 105 bits (116), Expect = 6e-18
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || |||||||| | || | | | ||||| | |||||||||
Sbjct 653845 GTGGACTCCTTTTGGATGTTGTAATCAGATAGAGTTCGTCCA-TCCTCTAACTGCTTGCC 653903
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | |||||||| || ||||| || || |||||||| ||| ||| ||||
Sbjct 653904 AGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGGAT-TTTGGCTT 653962
Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | ||| | |||||| | || || || || | ||||| |||||| || || ||||
Sbjct 653963 TCACATTCTCGATCGTGTCAGAGGCTTCGACTTCCAAGGTGATGGTTTTCCCTGTGAGAG 654022
Query 133642 TTTTTACGAAAATCTGCAT 133660
| |||||||||||||||||
Sbjct 654023 TCTTTACGAAAATCTGCAT 654041
Score = 105 bits (116), Expect = 6e-18
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || |||||||| | || | | | ||||| | |||||||||
Sbjct 654529 GTGGACTCCTTTTGGATGTTGTAATCAGATAGAGTTCGTCCA-TCCTCTAACTGCTTGCC 654587
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | |||||||| || ||||| || || |||||||| ||| ||| ||||
Sbjct 654588 AGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGGAT-TTTGGCTT 654646
Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | ||| | |||||| | || || || || | ||||| |||||| || || ||||
Sbjct 654647 TCACATTCTCGATCGTGTCAGAGGCTTCGACTTCCAGGGTGATGGTTTTCCCTGTGAGAG 654706
Query 133642 TTTTTACGAAAATCTGCAT 133660
| |||||||||||||||||
Sbjct 654707 TCTTTACGAAAATCTGCAT 654725
Score = 102 bits (112), Expect = 8e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||| ||||||||||| || || |||||| | ||| || ||||| ||
Sbjct 1010128 ATGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAAAGCGTTCTTCCATCTTCGAGTTG 1010187
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|| || ||| | || | || || ||||| ||||| || ||||| ||||| ||| ||
Sbjct 1010188 TTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCC-TGAATTT 1010246
Query 133577 TTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| || |||| | ||| | |||||||| | ||| || |||| ||| | |||||||| |
Sbjct 1010247 TGGCCTTGACATTCTCGATCGTGTCGGAAGCCTCAACCTCGAGGGTTATCGTTTTGCCTG 1010306
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| || ||||| |||||||||||
Sbjct 1010307 TCAACGTCTTTACAAAAATCTGCAT 1010331
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| ||||| |||||||||||||| | ||| | | | || ||||| || || ||
Sbjct 1010819 GTGGATTCTTTTTGTATATTGTAATCAGAGAGTGTGCGTCCA-TCTTCGAGTTGTTTTCC 1010877
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || || ||||| ||||| || ||||| ||||| ||||| |||
Sbjct 1010878 AGCGAAGATCAGTCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCTT 1010937
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||| |||| | ||| || |||| ||| | || ||||| |||| ||
Sbjct 1010938 GACGTTTTCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTCAACGT 1010997
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || |||||||||||
Sbjct 1010998 CTTGACAAAAATCTGCAT 1011015
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||||||||||||||| | ||| | | | || ||||| || || ||
Sbjct 1011047 GTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGTCCA-TCTTCGAGTTGTTTTCC 1011105
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
||| | || | || || ||||| ||||| || ||||| ||||| ||| ||| || |
Sbjct 1011106 AGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTCC-TGAATTTTGGCCT 1011164
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||| |||| | ||| || |||| ||| | || || || |||| ||
Sbjct 1011165 TGACGTTCTCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTTCCAGTCAAAG 1011224
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || |||||||||||
Sbjct 1011225 TCTTGACAAAAATCTGCAT 1011243
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
||||| || ||||||||||||||||| | ||| | || ||||| || || ||
Sbjct 1010363 GTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGCCCATCTTCGAGTTGTTTTCCA 1010422
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || || || || ||||| ||||| || || || ||||| ||||| ||||
Sbjct 1010423 GCGAAGATCAGTCGTTGTTGGTCCGGAGGTATTCCCTCTTTGTCCTGAATCTTGGCCTTG 1010482
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||| | ||| |||| | ||| || |||| ||| | || ||||| |||| ||
Sbjct 1010483 ACATTCTCGATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTCAATGTC 1010542
Query 133644 TTTACGAAAATCTGCAT 133660
|| || |||||||||||
Sbjct 1010543 TTGACAAAAATCTGCAT 1010559
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/200 (72%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||||||||||||||| | ||| | | | || ||||| || || ||
Sbjct 1011275 GTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGTCCA-TCTTCGAGTTGTTTTCC 1011333
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581
||| | || | || || ||||| ||||| || ||||| ||||| ||| ||| | ||
Sbjct 1011334 AGCGAAGATCAATCGTTGTTGGTCCGGAGGAATTCCTTCTTTGTC-CTGAATTTTGGCCT 1011392
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||| |||| | ||| || |||| ||| | || ||||| || | |
Sbjct 1011393 TGACGTTCTCAATCGTATCGGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTTAACG 1011452
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || ||||| |||||||||
Sbjct 1011453 TCTTGACGAAGATCTGCATG 1011472
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| || |||||||| | || | | | ||||| ||
Sbjct 654292 AAATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGATAGAGTTCGTCCA-TCCTCTAG 654350
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||||| ||| | || | |||||||| || ||||| || || ||||| || |||
Sbjct 654351 TTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTATCCTGGAT 654410
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | || | ||| || | | || || || | ||||| ||||| |
Sbjct 654411 -TTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGACTTCCAGGGTGATAGTTTTCC 654469
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| |||||||||||||||||
Sbjct 654470 CTGTGAGAGTCTTTACGAAAATCTGCAT 654497
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || |||||||| || |||||||| | || | | | ||||| ||
Sbjct 654748 AAATGAAGAGTAGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGTCCA-TCCTCTAG 654806
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||||| ||| | || | |||||||| || ||||| || || ||||| || |||
Sbjct 654807 TTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTATCCTGGAT 654866
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | || | ||| || | | || || || | ||||| ||||| |
Sbjct 654867 -TTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGACTTCCAGGGTGATAGTTTTCC 654925
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| |||||||||||||||||
Sbjct 654926 CTGTGAGAGTCTTTACGAAAATCTGCAT 654953
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||||||||||||||| | ||| | | | ||||| |||||||| ||
Sbjct 1010591 GTGGATTCCTTCTGTATATTGTAATCAGAGAGTGTGCGTCCA-TCCTCCAGCTGCTTTCC 1010649
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
|| | || | || || || || ||||| || || || ||||| ||| ||| || |
Sbjct 1010650 GGCAAAGATTAATCGTTGTTGATCCGGAGGTATTCCCTCTTTGTCC-TGAATTTTGGCCT 1010708
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||| || | | ||| || || | |||| || || || |||| |
Sbjct 1010709 TGACATTCTCAATCGTATCAGAAGCCTCGACTTCCAATGTGATAGTCTTCCCAGTCAACG 1010768
Query 133642 TTTTTACGAAAATCTGCAT 133660
|||| || |||||||||||
Sbjct 1010769 TTTTCACAAAAATCTGCAT 1010787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483115229712320
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