Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq16708 122 6e-23 seq21718 113 3e-20 seq36416 100 2e-16 >seq16708 Length=1145218 Score = 122 bits (134), Expect = 6e-23 Identities = 173/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||||||| |||| |||| ||| |||||| || || ||||| Sbjct 1010549 AAAATCTGCATTCCACCTCTCAATCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATA 1010608 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| |||||||||||| | || |||| || ||||||||||| || || || || Sbjct 1010609 TTGTAATCAGAGAGTGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAGATTAATCGTTGT 1010668 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 ||||| | || | || |||||||| |||||| | | |||| || | || || Sbjct 1010669 TGATCCGGAGGTATTCCCTCTTTGTCCTGAATTTT-GGCCTTGACATTCTCAATCGTATC 1010727 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || | ||||| || || || || |||||||| ||||| |||||||| Sbjct 1010728 AGAAGCCTCGACTTCCAATGTGATAGTCTTCCCAGTCAACGTTTTCACAAAAATCTGCAT 1010787 Score = 116 bits (128), Expect = 2e-21 Identities = 172/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||||| |||| |||| ||| |||||| || || ||||| Sbjct 1011233 AAAATCTGCATTCCGCCTCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATA 1011292 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| |||||||||||| | || || | ||||||||| || || ||||| || || Sbjct 1011293 TTGTAATCAGAGAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGT 1011352 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||||||||||| |||||| | | || | || | || || Sbjct 1011353 TGGTCCGGAGGAATTCCTTCTTTGTCCTGAATTTT-GGCCTTGACGTTCTCAATCGTATC 1011411 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || | || ||||| || ||||||||||| || || ||||||||||| Sbjct 1011412 GGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTTAACGTCTTGACGAAGATCTGCAT 1011471 Score = 113 bits (124), Expect = 3e-20 Identities = 171/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||||| |||| |||| ||| || || |||||| || ||| Sbjct 1010093 AAAATCTGCATTCCGCCTCTCAGTCGTAGAACCAGATGAAGGGTCGACTCTTTCTGGATG 1010152 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || |||||||| || || | | | || || | ||||||||| || || ||||| || || Sbjct 1010153 TTATAATCGGAAAGCGTTCTTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGT 1010212 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||||||||||| |||||| | | |||| || | ||||| Sbjct 1010213 TGGTCCGGAGGAATTCCTTCTTTGTCCTGAATTTT-GGCCTTGACATTCTCGATCGTGTC 1010271 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || | || |||||||| ||||| ||||| |||||||| |||||||| Sbjct 1010272 GGAAGCCTCAACCTCGAGGGTTATCGTTTTGCCTGTCAACGTCTTTACAAAAATCTGCAT 1010331 Score = 111 bits (122), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || ||| ||| ||||| ||||||||||| ||||| || ||| | || || Sbjct 654973 ACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGAGAGAGTACGTCCATCCTCT 655032 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| || || || || ||||||||||||||||| | || | ||||| || || Sbjct 655033 AGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 655092 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| |||| || | || | ||||| | ||| || || | ||||| ||||| Sbjct 655093 ATTTTGGCTTTC-ACGTTTTCGATCGTGTCTGAAGCTTCGACTTCCAGGGTGATGGTTTT 655151 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 ||||| | || || |||||||||||||| |||| Sbjct 655152 CCCTGTGAGAGTCTTGACAAAGATCTGCATGGTTG 655186 Score = 107 bits (118), Expect = 1e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || |||||||| |||| |||| ||| |||||| || || ||||| Sbjct 1011005 AAAATCTGCATTCCGCCTCTCAATCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATA 1011064 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| |||||||||||| | || || | ||||||||| || || ||||| || || Sbjct 1011065 TTGTAATCAGAGAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGT 1011124 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||||||||||| |||||| | | || | || | || || Sbjct 1011125 TGGTCCGGAGGAATTCCTTCTTTGTCCTGAATTTT-GGCCTTGACGTTCTCAATCGTATC 1011183 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || | || ||||| || || || || || || ||||| |||||||| Sbjct 1011184 GGAAGCCTCAACCTCGAGGGTTATCGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCAT 1011243 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || ||| ||| ||||| ||||||||||| || || || ||| | || || Sbjct 653833 ACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGATAGAGTTCGTCCATCCTCT 653892 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 || || || || || || ||||||||||||||||| | || | || || ||||| Sbjct 653893 AACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGG 653952 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| |||| |||| || | ||||| | ||| || || | ||||| ||||| Sbjct 653953 ATTTTGGCTTTC-ACATTCTCGATCGTGTCAGAGGCTTCGACTTCCAAGGTGATGGTTTT 654011 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| | || ||||| || |||||||| Sbjct 654012 CCCTGTGAGAGTCTTTACGAAAATCTGCAT 654041 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || ||| ||| ||||| ||||||||||| || || || ||| | || || Sbjct 654517 ACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGATAGAGTTCGTCCATCCTCT 654576 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 || || || || || || ||||||||||||||||| | || | || || ||||| Sbjct 654577 AACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGG 654636 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| |||| |||| || | ||||| | ||| || || | ||||| ||||| Sbjct 654637 ATTTTGGCTTTC-ACATTCTCGATCGTGTCAGAGGCTTCGACTTCCAGGGTGATGGTTTT 654695 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| | || ||||| || |||||||| Sbjct 654696 CCCTGTGAGAGTCTTTACGAAAATCTGCAT 654725 Score = 98.7 bits (108), Expect = 7e-16 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||| | || | || | ||| |||||| ||||||||||| Sbjct 1010777 AAAATCTGCATTCCACCTCGAAGGCGGAGTACAAGATGCAGAGTGGATTCTTTTTGTATA 1010836 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| |||||||||||| | || || | ||||||||| || || |||| || || Sbjct 1010837 TTGTAATCAGAGAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAGTCGTTGT 1010896 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||||||||||| ||| || | | || | || | || || Sbjct 1010897 TGGTCCGGAGGAATTCCTTCTTTGTCTTGAATCTT-GGCCTTGACGTTTTCAATCGTATC 1010955 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || | || ||||| || ||||| ||||| || ||||| |||||||| Sbjct 1010956 GGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTCAACGTCTTGACAAAAATCTGCAT 1011015 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| ||| || || |||||||| || || | || ||| | || ||| Sbjct 654061 ACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGACAAAGTACGTCCATCCTCC 654120 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || || || |||||||||||||||||||| | || | || || ||||| Sbjct 654121 AGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGG 654180 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| |||| |||| || | ||||| | ||| || || | ||||| ||||| Sbjct 654181 ATTTTGGCTTTC-ACATTCTCGATCGTGTCAGAGGCTTCGACTTCCAGGGTGATGGTTTT 654239 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| | || ||||| || |||||||| Sbjct 654240 CCCTGTGAGAGTCTTTACGAAAATCTGCAT 654269 Score = 95.1 bits (104), Expect = 8e-15 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||||| |||| |||| ||| |||||| || || ||||| Sbjct 1010321 AAAATCTGCATTCCGCCTCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATA 1010380 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| ||||||||||| | || || | ||||||||| || || |||| || || Sbjct 1010381 TTGTAATCAGAGAGTGTGCGCCCATCTTCGAGTTGTTTTCCAGCGAAGATCAGTCGTTGT 1010440 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | || |||||||| ||| || | | |||| || | || || Sbjct 1010441 TGGTCCGGAGGTATTCCCTCTTTGTCCTGAATCTT-GGCCTTGACATTCTCGATCGTATC 1010499 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || | || ||||| || ||||| || || || ||||| |||||||| Sbjct 1010500 GGAAGCCTCAACCTCGAGGGTTATCGTCTTGCCTGTCAATGTCTTGACAAAAATCTGCAT 1010559 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| ||| || || ||||||||||| || || || ||| | || || Sbjct 654289 ACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGATAGAGTTCGTCCATCCTCT 654348 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| || || || || ||||||||||||||||| | || | || || || || Sbjct 654349 AGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTATCCTGG 654408 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| |||| || | || | || || | ||| || || | ||||| ||||| Sbjct 654409 ATTTTGGCTTTC-ACGTTTTCGATCGTATCTGAAGCTTCGACTTCCAGGGTGATAGTTTT 654467 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| | || ||||| || |||||||| Sbjct 654468 CCCTGTGAGAGTCTTTACGAAAATCTGCAT 654497 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| ||||| || ||||||||||| || || || ||| | || || Sbjct 654745 ACCAAATGAAGAGTAGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGTCCATCCTCT 654804 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| || || || || ||||||||||||||||| | || | || || || || Sbjct 654805 AGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGAATTCCCTCCTTATCCTGG 654864 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| |||| || | || | || || | ||| || || | ||||| ||||| Sbjct 654865 ATTTTGGCTTTC-ACGTTTTCGATCGTATCTGAAGCTTCGACTTCCAGGGTGATAGTTTT 654923 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| | || ||||| || |||||||| Sbjct 654924 CCCTGTGAGAGTCTTTACGAAAATCTGCAT 654953 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| | ||| | || | ||| || || ||| || || ||||| ||||| || Sbjct 1009876 ACCTCCTCGGAGACGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCAGA 1009935 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || || || || ||||| || || ||||| | ||||| || | || Sbjct 1009936 AAGTGTGCGTCCATCTTCTAACTGCTTTCCAGCGAAGATCAATCTTTGCTGGTCCGGTGG 1009995 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| |||| |||| || | ||| ||| | || | Sbjct 1009996 AATTCCTTCTTTGTCTTGAATTTTAGCTTTC-ACATTTTCGATGGTATCGGACGCCTCGA 1010054 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || || ||||| |||||||| Sbjct 1010055 CTTCCAATGTGATAGTCTTCCCAGTCAGAGTCTTAACAAAAATCTGCAT 1010103 >seq21718 Length=958615 Score = 113 bits (124), Expect = 3e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||| || ||||| |||||||| || |||||| | || |||||||| ||||| ||||| | Sbjct 51081 CTTTCTGAATGTTATAATCGGAAAGGGTGCGTCCATCCTCCAATTGCTTTCCAGCAAAGA 51140 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||||||||| ||||| | || | || |||||||| ||| || || || |||| Sbjct 51141 TCAAACGCTGTTGATCGGGTGGGATTCCCTCTTTGTCTTGAATCTT-TGCTTTCACATTC 51199 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | |||||| | || || || | || ||||||||||| || | ||||| || Sbjct 51200 TCGATAGTGTCGGAAGCCTCTACCTCGAGGGTAATCGTTTTACCCGTCAGGGTTTTCACG 51259 Query 33739 AAGATCTGCATAGT 33752 || |||||||| || Sbjct 51260 AATATCTGCATCGT 51273 >seq36416 Length=241146 Score = 100 bits (110), Expect = 2e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||||||| |||||||||||||||| ||| ||| ||||| ||||| |||||||| Sbjct 80654 CCGCCTCTCAAGCGTAACACCAAATGTAACGTGGACTCCTTTTGGATGTTATAATCGGAC 80595 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635 || || | | || ||||||||||| ||||||||||||| | || ||||| Sbjct 80594 AGAGTTCTCCCATCCTCCAATTGTTTGCCGGCAAAAATCAGTCTTTGTTGATC 80542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328501420546560