Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_025442.1 Length=59578 Score E Sequences producing significant alignments: (Bits) Value seq30442 253 8e-63 >seq30442 Length=231 Score = 253 bits (280), Expect = 8e-63 Identities = 194/230 (84%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48096 GACGCGGACTTCCGGGTGTAGCGTACGTCATTCTGCATCGACTTGATCGTGGCGCGCAGC 48155 |||||||||| |||||||| ||||||| ||||||||||||||| | ||||||||||||| Sbjct 230 GACGCGGACTGTCGGGTGTACCGTACGTTATTCTGCATCGACTTAACCGTGGCGCGCAGC 171 Query 48156 TTAGTCGTTTCCCGGTCGTGCTCAGTGTTATCTTCGGCGTGACGGCGGTGTGCCTCGGAT 48215 || || | |||| ||||||||| |||||||| || ||||| ||||| || || |||| Sbjct 170 TTTGTGATCTCCCTGTCGTGCTCGGTGTTATCGTCAGCGTGTCGGCGATGGGCTTCGGCC 111 Query 48216 AACTGGATTTGCAGACTGGTAACAGCGCCCTCGGCGGTATCGAGACGGCGGCCTTTGTCT 48275 |||||||||||||||||||| ||||||| || || |||||||| | |||| ||| Sbjct 110 AACTGGATTTGCAGACTGGTGACAGCGCTTTCCGCCGTATCGAGGCTGCGGGTCTTGGTA 51 Query 48276 TCCAGCGCTTCCCGCAGCGCGGCCAGTTCGCCCGGCGTGATGTTGGCGAG 48325 ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 50 TCCAGCGCTTCGCGTAGTGCGGCCAGTTCGCCCGGCGTGATGTTGGCGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190413588888640