Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq16708 122 9e-23 seq21718 116 4e-21 >seq16708 Length=1145218 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||| | |||| || || | || || || || ||||| |||||||||||||| | Sbjct 654041 TTCCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCG 654100 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| | | | || || ||||| ||||| || |||||||||||||||||||| || Sbjct 654101 ACAAAG-TACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCAGGA 654159 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || || ||||| ||| || || | ||||| || | ||| Sbjct 654160 GGAATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAGGCTTCG 654219 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || |||||||| || || | ||| || |||||||| |||||| Sbjct 654220 ACTTCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCATT 654270 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | |||| || || || || |||||||| |||||||| |||||||| || Sbjct 654497 TTCCTCCACGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAG 654556 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || || | ||| ||||| || || ||||||||||||||||| || | Sbjct 654557 ATAGAGTTCGTCCATCCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 654616 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || ||||| ||| || || | ||||| || | ||| | Sbjct 654617 GAATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAGGCTTCGA 654676 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || |||||||| || || | ||| || |||||||| |||||| Sbjct 654677 CTTCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCATT 654726 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| |||| || || || || |||||||| |||||||| |||||||| || Sbjct 653815 CCTCCTCGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAGAT 653874 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||| ||||| || || ||||||||||||||||| || || Sbjct 653875 AGAGTTCGTCCATCCTCTAACTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAGGA 653934 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || ||||| ||| || || | ||||| || | ||| || Sbjct 653935 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTCTCGATCGTGTCAGAGGCTTCGACT 653994 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || |||||||| || || | ||| || |||||||| |||||| Sbjct 653995 TCCAAGGTGATGGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCATT 654042 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | |||| || || || || |||||||| |||||||| |||||||| || Sbjct 654953 TTCCTCCACGAAGTCTCAGGACCAGATGAAGCGTGGACTCCTTTTGGATGTTGTAATCAG 655012 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || || || || ||||| || || ||||||||||||||||| || | Sbjct 655013 AGAGAGTACGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 655072 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || ||||| ||| || || | ||||| || | ||| | Sbjct 655073 GAATTCCTTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTGTCTGAAGCTTCGA 655132 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || |||||||| || || | ||| || || || || ||||| Sbjct 655133 CTTCCAGGGTGATGGTTTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 655181 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| ||||| | || || || || ||||||||||| || || ||||| || Sbjct 1011243 TTCCGCCTCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAG 1011302 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || ||||| ||||| || || || ||||| || || || || || | Sbjct 1011303 AGAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAG 1011362 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || |||||||| || |||||||| ||||| || | || ||||| | || | Sbjct 1011363 GAATTCCTTCTTTGTCCTGAATTTTGGCCTTGACGTTCTCAATCGTATCGGAAGCCTCAA 1011422 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || || || || || ||||| || || ||||| || ||||| Sbjct 1011423 CCTCGAGGGTTATCGTCTTGCCTGTTAACGTCTTGACGAAGATCTGCAT 1011471 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| | ||| | || || || || ||||||||||| || || ||||| || Sbjct 1011015 TTCCGCCTCTCAATCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAG 1011074 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || ||||| ||||| || || || ||||| || || || || || | Sbjct 1011075 AGAGTGTGCGTCCATCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGAG 1011134 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || |||||||| || |||||||| ||||| || | || ||||| | || | Sbjct 1011135 GAATTCCTTCTTTGTCCTGAATTTTGGCCTTGACGTTCTCAATCGTATCGGAAGCCTCAA 1011194 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | ||||| || || || || || || ||||| || || ||||| |||||| Sbjct 1011195 CCTCGAGGGTTATCGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCATT 1011244 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| ||| || | ||||| || || || || ||||| || ||||| || || | Sbjct 1009877 CCTCCTCGGAGACGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCAGAA 1009936 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||| || || || || ||||| | ||||| || || || Sbjct 1009937 AGTGTGCGTCCATCTTCTAACTGCTTTCCAGCGAAGATCAATCTTTGCTGGTCCGGTGGA 1009996 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| ||| || || | || ||||||| || || Sbjct 1009997 ATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCGATGGTATCGGACGCCTCGACT 1010056 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || || || || || || | ||| ||||| ||||| |||||| Sbjct 1010057 TCCAATGTGATAGTCTTCCCAGTCAGAGTCTTAACAAAAATCTGCATT 1010104 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | |||| || || | || || || || ||||| ||||||||||| || Sbjct 654269 TTCCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAG 654328 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || || || || ||||| || || ||||||||||||||||| || | Sbjct 654329 ATAGAGTTCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 654388 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || ||||| ||| || || | || || || | ||| | Sbjct 654389 GAATTCCCTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGA 654448 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || || ||||| || || | ||| || |||||||| |||||| Sbjct 654449 CTTCCAGGGTGATAGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCATT 654498 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | |||| || || | || || || ||||| || ||||||||||| || Sbjct 654725 TTCCTCCACGAAGTCTCAGGACCAAATGAAGAGTAGATTCTTTCTGAATGTTGTAATCAG 654784 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || || || || ||||| || || ||||||||||||||||| || | Sbjct 654785 ATAGAGTTCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGCTGCTGATCAGGAG 654844 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || ||||| ||| || || | || || || | ||| | Sbjct 654845 GAATTCCCTCCTTATCCTGGATTTTGGCTTTCACGTTTTCGATCGTATCTGAAGCTTCGA 654904 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || || ||||| || || | ||| || |||||||| |||||| Sbjct 654905 CTTCCAGGGTGATAGTTTTCCCTGTGAGAGTCTTTACGAAAATCTGCATT 654954 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| ||||| | || || || || ||||||||||| || || ||||| || Sbjct 1010331 TTCCGCCTCTCAGTCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAG 1010390 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || ||||| ||||| || || || |||| || || || || || | Sbjct 1010391 AGAGTGTGCGCCCATCTTCGAGTTGTTTTCCAGCGAAGATCAGTCGTTGTTGGTCCGGAG 1010450 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 |||| || ||||| || ||||| || ||||| || | || ||||| | || | Sbjct 1010451 GTATTCCCTCTTTGTCCTGAATCTTGGCCTTGACATTCTCGATCGTATCGGAAGCCTCAA 1010510 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | ||||| || || || || || || || || || || ||||| |||||| Sbjct 1010511 CCTCGAGGGTTATCGTCTTGCCTGTCAATGTCTTGACAAAAATCTGCATT 1010560 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| | ||| | || || || || ||||||||||| || || ||||| || Sbjct 1010559 TTCCACCTCTCAATCGTAGAACCAGATGAAGAGTGGATTCCTTCTGTATATTGTAATCAG 1010618 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || || ||||| || || ||||| || || || || ||||| || | Sbjct 1010619 AGAGTGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAGATTAATCGTTGTTGATCCGGAG 1010678 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 |||| || ||||| || |||||||| ||||| || | || || || | || | Sbjct 1010679 GTATTCCCTCTTTGTCCTGAATTTTGGCCTTGACATTCTCAATCGTATCAGAAGCCTCGA 1010738 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | || || || || || || || ||||| || ||||| |||||| Sbjct 1010739 CTTCCAATGTGATAGTCTTCCCAGTCAACGTTTTCACAAAAATCTGCATT 1010788 >seq21718 Length=958615 Score = 116 bits (128), Expect = 4e-21 Identities = 141/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 134524 CCTTT-TGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| |||||||| || ||| || |||| | || || | || || || ||||| Sbjct 51080 CCTTTCTGAATGTTATAATCGGAAAGGGTGCGTCCATCCTCCAATTGCTTTCCAGCAAAG 51139 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 ||||||||||| |||||||| || || || ||||| |||||||| ||| ||| || Sbjct 51140 ATCAAACGCTGTTGATCGGGTGGGATTCCCTCTTTGTCTTGAATCTTTGCTTTCACATTC 51199 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | |||||||| | || || ||||| ||||| |||||||| || | ||||| ||| Sbjct 51200 TCGATAGTGTCGGAAGCCTCTACCTCGAGGGTAATCGTTTTACCCGTCAGGGTTTTCACG 51259 Query 134703 AAAATTTGCAT 134713 || || ||||| Sbjct 51260 AATATCTGCAT 51270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505078937671360