Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_027402.1
Length=240413
Score E
Sequences producing significant alignments: (Bits) Value
seq50200 104 4e-17
>seq50200
Length=540
Score = 104 bits (114), Expect = 4e-17
Identities = 163/228 (71%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 198332 TCATGTCAGCTCTATCAACGCAG-TGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGC 198390
|| |||||||||||||| ||| |||| || ||||||||||| ||||||| || |||||
Sbjct 476 TCCTGTCAGCTCTATCAGCGCTCATGCG-ATATTTTCCTCGGCCTGCCGTTTAATATCGC 418
Query 198391 GTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGG---GCGA 198447
|| || || || || || ||| | || |||||| | || ||| || | ||
Sbjct 417 CAGCTATGCCTTGCTGGTACATATGCTGGCGCAGCAG--TGCGAT-TTGCAGGTCTGTGA 361
Query 198448 TTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCT 198507
|||| | ||||| || || || || ||||||||| ||| ||| || ||||||| | ||
Sbjct 360 TTTCGTCTGGACCGGAGGCGATACCCATCTCTACAGTAACCATTTGCAGCAGGCGGACCT 301
Query 198508 CCAGCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCG 198555
||||| || ||||| || | || | ||| | ||| | || |||||
Sbjct 300 GCAGCTAACCCGTGATCCTCTGCCGCTGCCGCAGCTGCTGATTAAGCG 253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 768707392725440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |