Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_027404.1 Length=167785 Score E Sequences producing significant alignments: (Bits) Value seq12851 116 4e-21 >seq12851 Length=316 Score = 116 bits (128), Expect = 4e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138883 GCTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCA 138942 |||| || || ||||||||||| || | ||||| |||| ||||| || ||||| | Sbjct 316 GCTGTACGCCGTAATCCATATGCCGCACCCGGTTGGCTTCCACGCCGCGATTGTTTTTTA 257 Query 138943 AAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGC 139002 || || ||| |||| | ||||||||||| |||||||| | || || ||||||| Sbjct 256 GCACCAGCAGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGC 197 Query 139003 CACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAA 139062 | || | || ||||| || || ||||| || || ||||| |||||||| | || |||| Sbjct 196 CGCGCACGCCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAA 137 Query 139063 TAACACCAGTATGG 139076 || ||| |||||| Sbjct 136 TACAACCGGTATGG 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536444698833600