Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq48246 98.7 3e-15 >seq48246 Length=3565318 Score = 98.7 bits (108), Expect = 3e-15 Identities = 95/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 443705 CGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCT 443764 |||||| ||||||| ||||| | |||||| || | || || |||||||| ||| || Sbjct 2532030 CGAGCGCGTAGTCGCATTTGCCGCGGTCGAGGGCATTTTCTTCAGCGGCAGTTTT-GCTG 2531972 Query 443765 CCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGA 443824 | || ||||||||||| ||||| || ||||||| ||| |||| || ||||||||||| | Sbjct 2531971 CTATTTTCTGGTTGAAGAAGCGAGGTCTTATGCCCGGATTGACGTTCAGTAACGAACTTA 2531912 Query 443825 T 443825 | Sbjct 2531911 T 2531911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587306913134760