Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_027991.1
Length=147303
Score E
Sequences producing significant alignments: (Bits) Value
seq30442 327 1e-84
seq34821 118 1e-21
>seq30442
Length=231
Score = 327 bits (362), Expect = 1e-84
Identities = 211/231 (91%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44977 TGACGCGGACTTCCGGGTGTAGCGTACGTCATTCTGCATCGACTTGATCGTGGCGCGCAG 45036
||||||||||| |||||||| ||||||| ||||||||||||||| | ||||||||||||
Sbjct 231 TGACGCGGACTGTCGGGTGTACCGTACGTTATTCTGCATCGACTTAACCGTGGCGCGCAG 172
Query 45037 CTTAGTGATTTCCCGGTCGTGCTCGGTGTTATCATCGGCGTGACGGCGGTGGGCCTCGGA 45096
||| ||||| |||| |||||||||||||||||| || ||||| ||||| ||||| ||||
Sbjct 171 CTTTGTGATCTCCCTGTCGTGCTCGGTGTTATCGTCAGCGTGTCGGCGATGGGCTTCGGC 112
Query 45097 TAACTGGATTTGCAGACTGGTGACAGCGCTTTCCGCCGTATCGAGGCTACGAGTCTTGGT 45156
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 111 CAACTGGATTTGCAGACTGGTGACAGCGCTTTCCGCCGTATCGAGGCTGCGGGTCTTGGT 52
Query 45157 ATCCAGCGCTTCGCGTAGTGCAGCCAGTTCGCCCGGCGTGATGTCGGCGAG 45207
||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 51 ATCCAGCGCTTCGCGTAGTGCGGCCAGTTCGCCCGGCGTGATGTTGGCGAG 1
>seq34821
Length=220
Score = 118 bits (130), Expect = 1e-21
Identities = 133/178 (75%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 58085 CAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTC 58144
||||| ||||| || |||||||| ||||| | ||||| ||||| || || ||||| ||
Sbjct 1 CAGCTCATTAAGGAGCACGGCTGCAAAGCTGTGCTGGCCTTCAATCCCGCCACGCCACTG 60
Query 58145 AGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCA 58204
|| | || || || || |||| ||||| ||| | || |||||||||| || || ||
Sbjct 61 AGCTGCCTTGAGTATGTGCTGGATAAACTTGATATAATTTTGCTGATGTCGGTCAATCCT 120
Query 58205 GGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTC 58262
|| || || |||||||||||| | || ||| |||||||| ||||| | | |||||
Sbjct 121 GGTTTTGGGGGCCAGTCTTTTCTGCCTTCGACCCTGGATAAGTTGCGCCAGGCGCGTC 178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 470943728184640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |