Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq35862 107 2e-18
>seq35862
Length=1028256
Score = 107 bits (118), Expect = 2e-18
Identities = 168/238 (71%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 89161 CCGATTCAGACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAAC 89220
|||| ||| |||||| | | ||| |||| | ||||||||| ||||| || ||
Sbjct 908790 CCGACACAGTAGAATGGGCTGCCTGGCAAGACAGAGGCGATCCTGTGTTGCACATCGAT- 908848
Query 89221 TTAGG-AGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAG 89279
|||| | ||||| ||| | || | || || |||||| || ||||| || | ||
Sbjct 908849 TTAGTCAAATGGGCAGATCTGTTCTTGATAGCCCCACTAGACGCCAATACACTTGGTAAA 908908
Query 89280 ATAGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATATATCA 89339
|| || | ||||||| |||| || || |||||| | | | | || |||||| |
Sbjct 908909 ATGGCCAGTGGTATAAGCGATAATATATTAACTTGTGTTGCACGTGCCTGGGATCCTTTG 908968
Query 89340 AAGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACTG 89397
||||| || | ||||||||||| ||||||||| ||||||||||||||| ||||||
Sbjct 908969 AAGCCACTGGTATTTTGTCCTGCTATGAATACTAAAATGTGGGAACATCCAGTTACTG 909026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602799529416320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |