Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq21718 143 2e-29
seq16708 136 3e-27
seq36416 95.1 1e-14
>seq21718
Length=958615
Score = 143 bits (158), Expect = 2e-29
Identities = 147/191 (77%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || ||||| ||||| || || | ||||| || || || || | |||
Sbjct 51270 ATGCAGATATTCGTGAAAACCCTGACGGGTAAAACGATTACCCTCGAGGTAGAGGCTTCC 51211
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || ||| ||| |||||||||||||| || || ||||||||||||
Sbjct 51210 GACACTATCGAGAATGTGAAAGCAAAGATTCAAGACAAAGAGGGAATCCCACCCGATCAA 51151
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | || || || |||||||| || | ||| |||||||||| |||
Sbjct 51150 CAGCGTTTGATCTTTGCTGGAAAGCAATTGGAGGATGGACGCACCCTTTCCGATTATAAC 51091
Query 27168 ATTCA-AAAGG 27177
||||| |||||
Sbjct 51090 ATTCAGAAAGG 51080
>seq16708
Length=1145218
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| |||||||| || |||| ||||| | || || || || || || | |||
Sbjct 1010331 ATGCAGATTTTTGTAAAGACGTTGACAGGCAAAACGATAACCCTCGAGGTTGAGGCTTCC 1010272
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| ||||| |||||||| ||||||||||| || || || || |||
Sbjct 1010271 GACACGATCGAGAATGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCAA 1010212
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | ||| || |||||| | ||||| | || |||||||||| |||
Sbjct 1010211 CAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGAAGAACGCTTTCCGATTATAAC 1010152
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || || ||||||||| | ||| |||||
Sbjct 1010151 ATCCAGAAAGAGTCGACCCTTCATCTGGTT 1010122
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || |||||||| || ||| |||| || | ||||| || |||||
Sbjct 1010103 ATGCAGATTTTTGTTAAGACTCTGACTGGGAAGACTATCACATTGGAAGTCGAGGCGTCC 1010044
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || ||| |||||||||||||||||||| || ||||| || ||
Sbjct 1010043 GATACCATCGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGAATTCCACCGGACCAG 1009984
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | ||| || || || || ||||| | || |||| ||||| |||
Sbjct 1009983 CAAAGATTGATCTTCGCTGGAAAGCAGTTAGAAGATGGACGCACACTTTCTGATTATAAC 1009924
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | ||| | ||| | ||| | || || ||
Sbjct 1009923 ATCCAGAAGGAGTCGACCCTTCATCTCGTTCTCCGTCTCCGAGGAGG 1009877
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||| || ||| | || || || || || || | |||
Sbjct 1011243 ATGCAGATTTTTGTCAAGACTTTGACTGGAAAGACGATAACCCTCGAGGTTGAGGCTTCC 1011184
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||||| ||||| |||||||| ||||||||||| || || || || |||
Sbjct 1011183 GATACGATTGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCAA 1011124
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | ||| || |||||| | ||||| | || | || ||||||||
Sbjct 1011123 CAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAAT 1011064
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | ||| ||||| | || ||| | || || ||
Sbjct 1011063 ATACAGAAGGAATCCACTCTTCATCTGGTTCTACGATTGAGAGGCGGAAT 1011014
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||||| || || || | || || || ||||| ||| | ||
Sbjct 654269 ATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCCTCT 654210
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| || ||| ||||| || ||||| || || || || || |||||
Sbjct 654209 GACACGATCGAGAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCTGATCAG 654150
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||| ||||| || |||| || | || | || || ||||||
Sbjct 654149 CAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAGGATGGACGTACTTTGTCGGACTACAAC 654090
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||||| |||||||| || | ||||||||
Sbjct 654089 ATTCAGAAGGAGTCTACTCTTCATTTGGT 654061
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||||| || || || | || || || ||||| ||| | ||
Sbjct 654725 ATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCCTCT 654666
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| || ||| ||||| || ||||| || || || || || |||||
Sbjct 654665 GACACGATCGAGAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCTGATCAG 654606
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||| ||||| || || || || | || | || |||||||||
Sbjct 654605 CAGCGTTTGATCTTCGCTGGCAAGCAGTTAGAGGATGGACGAACTCTATCTGATTACAAC 654546
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| ||||||||||| || | ||| ||||
Sbjct 654545 ATCCAAAAGGAGTCCACGCTTCATCTGGT 654517
Score = 120 bits (132), Expect = 3e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
|||||||||| ||||| || ||||| || || || | || || || ||||| ||| | |
Sbjct 655183 CCATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTT 655124
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
| ||| |||| || | || ||| ||||| || || || ||||| || || || ||||
Sbjct 655123 CAGACACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATC 655064
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| |||||||| || | ||| ||||| ||| | || || | || | || |||||||
Sbjct 655063 AGCAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGTACTCTCTCTGATTACA 655004
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|||| ||||||||||| || | ||| ||||
Sbjct 655003 ACATCCAAAAGGAGTCCACGCTTCATCTGGT 654973
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||||| || || || | || || | ||||| ||| | ||
Sbjct 654041 ATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCTTGGAAGTCGAAGCCTCT 653982
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| || ||| ||||| || ||||| || || || || || |||||
Sbjct 653981 GACACGATCGAGAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCTGATCAG 653922
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||| ||||| || || || || | || | || |||||||||
Sbjct 653921 CAGCGTTTGATCTTCGCTGGCAAGCAGTTAGAGGATGGACGAACTCTATCTGATTACAAC 653862
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| ||||||||||| || | ||| ||||
Sbjct 653861 ATCCAAAAGGAGTCCACGCTTCATCTGGT 653833
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||||| || || || |||| || || ||||| ||| | ||
Sbjct 654497 ATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACTATCACCCTGGAAGTCGAAGCTTCA 654438
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || ||| ||||| || || || || || || || || |||||
Sbjct 654437 GATACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAGGGAATTCCTCCTGATCAG 654378
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||| ||||| ||| | || || | || | || |||||||||
Sbjct 654377 CAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGAACTCTATCTGATTACAAC 654318
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||||| |||||||| || | ||||||||
Sbjct 654317 ATTCAGAAGGAGTCTACTCTTCATTTGGT 654289
Score = 111 bits (122), Expect = 1e-19
Identities = 151/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || | || |||||| | || || || || || || | ||
Sbjct 1011472 CATGCAGATCTTCGTCAAGACGTTAACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTC 1011413
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| ||||||||| ||||| |||||||| ||||||||||| || || || || ||
Sbjct 1011412 CGATACGATTGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCA 1011353
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| || || || | ||| || |||||| | ||||| | || | || ||||||||
Sbjct 1011352 ACAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAA 1011293
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || ||||| || || | ||| |||||
Sbjct 1011292 TATACAGAAGGAATCCACTCTTCATCTGGTT 1011262
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||||| || || || |||| || || ||||| ||| | ||
Sbjct 654953 ATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACTATCACCCTGGAAGTCGAAGCTTCA 654894
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || ||| ||||| || || || || || || || || |||||
Sbjct 654893 GATACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAGGGAATTCCTCCTGATCAG 654834
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||| ||||| ||| | || || | || | || |||||||||
Sbjct 654833 CAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGAACTCTATCTGATTACAAC 654774
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||||| || || || || | ||||||||
Sbjct 654773 ATTCAGAAAGAATCTACTCTTCATTTGGT 654745
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| |||||| | || || || || || || | |||
Sbjct 1011015 ATGCAGATTTTTGTCAAGACGTTGACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTCC 1010956
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||| | ||||| || ||||||||||||||||| || || || || |||
Sbjct 1010955 GATACGATTGAAAACGTCAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCGGACCAA 1010896
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || | || | ||| || |||||| | ||||| | || | || ||||||||
Sbjct 1010895 CAACGACTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAAT 1010836
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| || || || | ||| | || | || | || ||||| ||
Sbjct 1010835 ATACAAAAAGAATCCACTCTGCATCTTGTACTCCGCCTTCGAGGTGGAAT 1010786
>seq36416
Length=241146
Score = 95.1 bits (104), Expect = 1e-14
Identities = 97/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148
||| || |||||||||||||| | | || | ||||||||||||||||| || |
Sbjct 80529 AGGAATTCCACCCGATCAACAAAGACTGATTTTTGCCGGCAAACAATTGGAGGATGGGAG 80588
Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208
|| | |||||||| ||||| ||||||||||| || ||||||||||| || || ||| |
Sbjct 80589 AACTCTGTCCGATTATAACATCCAAAAGGAGTCCACGTTACATTTGGTGTTACGCTTGAG 80648
Query 27209 GGGTGGC 27215
|| |||
Sbjct 80649 AGGCGGC 80655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434643488079360
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