Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_028656.1 Length=65955 Score E Sequences producing significant alignments: (Bits) Value seq16755 102 3e-17 seq6354 96.9 1e-15 >seq16755 Length=287 Score = 102 bits (112), Expect = 3e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 27183 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT 27242 || || ||||||||||||| ||||| |||||||||||||||| ||||||||||||| | Sbjct 168 GGTCCCTTAGCTCAGTGGTTAGAGCAAGCGACTCATAATCGCTTAGTCGCTGGTTCAAGT 109 Query 27243 CCAGCAAGGGCCACCATAT 27261 |||||| |||||||||||| Sbjct 108 CCAGCAGGGGCCACCATAT 90 >seq6354 Length=387 Score = 96.9 bits (106), Expect = 1e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 1320 TGGTGTCCCCTGCAGGAATCGAACCTGCAATTAGCCCTTAGGAGGGGCTCGTTATATCCA 1379 |||||||||| ||||||||||||||| || || ||||||||||||||| ||||||||| Sbjct 266 TGGTGTCCCCGACAGGAATCGAACCTGTAACTAACCCTTAGGAGGGGCTTGTTATATCCG 207 Query 1380 TTTAACTAAGAGGACA 1395 |||||||||| |||| Sbjct 206 TTTAACTAAGGAGACA 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 210801203628768