Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_028672.1
Length=149732
Score E
Sequences producing significant alignments: (Bits) Value
seq11667 163 3e-35
>seq11667
Length=326
Score = 163 bits (180), Expect = 3e-35
Identities = 232/324 (72%), Gaps = 2/324 (1%)
Strand=Plus/Minus
Query 24285 GATGTCGTCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTATGA 24344
||||||||| || || | ||||||||| | ||| || |||||||||||||| || ||
Sbjct 323 GATGTCGTCGAACACCAGCGACGGATCGTTGACGATATTGCGGATGATATGGGTATAGGA 264
Query 24345 GCGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCTACCCATGTTTCCAGGGTTG-TGT 24403
||| || || || || ||| |||||||| || || ||||| ||||| || | | |
Sbjct 263 GCGCGAATGTATGGTTTCAGAAAACGCCCAGGTTTCCACCCAGGTTTCTAGCTCCGGTAT 204
Query 24404 CGGACACGATCGGGAGCAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGAAGGA 24463
|| | | | || | || | | || || | |||||||| | |||||||| ||
Sbjct 203 CGAAATC-AGAGGCAATAGCGCAACATTGGGGCTGCGGCCCTGGATTGAATCCAGCAGCG 145
Query 24464 TCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAGT 24523
|||| || || ||||| || || ||||| || || ||||| |||||||| | || |
Sbjct 144 TCTGATATTTGAGGTTACTAATAAAGATATGTTTTTCGTGCTCCGGCAGCGCCTGATAAT 85
Query 24524 CGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTCT 24583
|||| || || || | ||| | || ||||||||||||||||| |||| || ||| ||||
Sbjct 84 CGATGCGATCGCGAGACACATCTACCTCTTCCGGACGCCAGAAAAACGACAATTGTTTCT 25
Query 24584 CGATCAGCTTCTCGAACTTGGCGT 24607
| |||||||| || || || |||
Sbjct 24 CAATCAGCTTTTCAAATATGTCGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478711614997760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |