Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq11667 163 3e-35 >seq11667 Length=326 Score = 163 bits (180), Expect = 3e-35 Identities = 232/324 (72%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 24285 GATGTCGTCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTATGA 24344 ||||||||| || || | ||||||||| | ||| || |||||||||||||| || || Sbjct 323 GATGTCGTCGAACACCAGCGACGGATCGTTGACGATATTGCGGATGATATGGGTATAGGA 264 Query 24345 GCGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCTACCCATGTTTCCAGGGTTG-TGT 24403 ||| || || || || ||| |||||||| || || ||||| ||||| || | | | Sbjct 263 GCGCGAATGTATGGTTTCAGAAAACGCCCAGGTTTCCACCCAGGTTTCTAGCTCCGGTAT 204 Query 24404 CGGACACGATCGGGAGCAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGAAGGA 24463 || | | | || | || | | || || | |||||||| | |||||||| || Sbjct 203 CGAAATC-AGAGGCAATAGCGCAACATTGGGGCTGCGGCCCTGGATTGAATCCAGCAGCG 145 Query 24464 TCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAGT 24523 |||| || || ||||| || || ||||| || || ||||| |||||||| | || | Sbjct 144 TCTGATATTTGAGGTTACTAATAAAGATATGTTTTTCGTGCTCCGGCAGCGCCTGATAAT 85 Query 24524 CGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTCT 24583 |||| || || || | ||| | || ||||||||||||||||| |||| || ||| |||| Sbjct 84 CGATGCGATCGCGAGACACATCTACCTCTTCCGGACGCCAGAAAAACGACAATTGTTTCT 25 Query 24584 CGATCAGCTTCTCGAACTTGGCGT 24607 | |||||||| || || || ||| Sbjct 24 CAATCAGCTTTTCAAATATGTCGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478711614997760