Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq12851 127 2e-24 >seq12851 Length=316 Score = 127 bits (140), Expect = 2e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 142871 CCGTAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTTTTTCAGAACGAGC 142930 ||||| |||||||| || | ||||| | || ||||| |||||||| || || ||| Sbjct 308 CCGTAATCCATATGCCGCACCCGGTTGGCTTCCACGCCGCGATTGTTTTTTAGCACCAGC 249 Query 142931 AGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATT 142990 ||| |||| | ||||||||||| |||||||| | || || |||||||| || | Sbjct 248 AGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGCCGCGCACG 189 Query 142991 CCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAATGGAATAACACCG 143050 || || || ||||| ||||| || || ||||||||||| || |||| |||||| |||| Sbjct 188 CCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAATACAACCG 129 Query 143051 GTATG 143055 ||||| Sbjct 128 GTATG 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545040861762240