Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq12851 143 3e-29 >seq12851 Length=316 Score = 143 bits (158), Expect = 3e-29 Identities = 205/289 (71%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 77188 GCTGAACGCCATAATCCAGGTGACGAATACGGTTATTCTCAACACCTTTGTTGTTTTTCA 77247 |||| ||||| ||||||| || || | ||||| || || || |||||||| | Sbjct 316 GCTGTACGCCGTAATCCATATGCCGCACCCGGTTGGCTTCCACGCCGCGATTGTTTTTTA 257 Query 77248 GAACCAGCAGGTTTTCAACTTCCAAATGCCAGATCGGATAATACAACGTTGCAGCACCAC 77307 | |||||||| |||| | ||||||||||| || ||||| ||||||| || || || | Sbjct 256 GCACCAGCAGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGC 197 Query 77308 CACGAACGCCACCTTGTGAACAGGATTTAACCGCTGTCTGAATATGTTTCCAGAACGGGA 77367 | || ||||| || || ||||||||||| ||||| ||||| | |||||| ||||||| | Sbjct 196 CGCGCACGCCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAA 137 Query 77368 TCACGCCTGTATGTACTGCTTCACCACCACGGATTTTAGAACCCATTGCGCGAATGTGTC 77427 | || ||||| | ||||| || || || || |||| ||||| || | | Sbjct 136 TACAACCGGTATGGAAAGCTTCGCCGCCGCGAATCGGGCTCCCCAACGCGCGGATACGGC 77 Query 77428 CAGCATTAACACCGATACCCGCGCGTTGTGAAATATACTTCACGATCGC 77476 | ||||| | || || || ||||| || || | ||| || || ||||| Sbjct 76 CGGCATTGATGCCTATCCCGGCGCGCTGGGATACATATTTTACAATCGC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568114267837440