Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_029045.1 Length=60216 Score E Sequences producing significant alignments: (Bits) Value seq30442 336 8e-88 >seq30442 Length=231 Score = 336 bits (372), Expect = 8e-88 Identities = 213/231 (92%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 48621 TGACGCGGACTTCCGGGTGTAGCGTACGTCATTCTGCATCGACTTGATCGTGGCGCGCAG 48680 ||||||||||| |||||||| ||||||| ||||||||||||||| | |||||||||||| Sbjct 231 TGACGCGGACTGTCGGGTGTACCGTACGTTATTCTGCATCGACTTAACCGTGGCGCGCAG 172 Query 48681 CTTAGTGATTTCCCGGTCGTGCTCGGTGTTATCATCGGCGTGACGGCGGTGGGCCTCGGA 48740 ||| ||||| |||| |||||||||||||||||| || ||||| ||||| ||||| |||| Sbjct 171 CTTTGTGATCTCCCTGTCGTGCTCGGTGTTATCGTCAGCGTGTCGGCGATGGGCTTCGGC 112 Query 48741 TAACTGGATTTGCAGACTGGTGACAGCGCTTTCCGCCGTATCGAGGCTGCGAGTCTTGGT 48800 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 111 CAACTGGATTTGCAGACTGGTGACAGCGCTTTCCGCCGTATCGAGGCTGCGGGTCTTGGT 52 Query 48801 ATCCAGCGCTTCGCGTAGTGCGGCCAGTTCGCCCGGCGTGATGTCGGCGAG 48851 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 51 ATCCAGCGCTTCGCGTAGTGCGGCCAGTTCGCCCGGCGTGATGTTGGCGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192453962918048