Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq12851 95.1 1e-14 >seq12851 Length=316 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 42113 CATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCTCAA 42172 ||||| ||| |||||| |||| ||||||||||| || || || ||||| |||||||| Sbjct 124 CATACCGGTTGTATTCCGTTCTATAAACATTTCCAGACCGCGGTCAAATCCTGTTCTCAG 183 Query 42173 GGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTAGAG 42232 || || | || || || || || || || ||||| |||||||| || || | || Sbjct 184 GGCGGCGTGCGCGGCGGCGCGGCCACGTTGTTCTATCCTATGTGGCATTTGGAGATCGAA 243 Query 42233 AACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAAAACCGTATTCGACATATGGAC 42292 | || | || || ||||| || |||||||| | ||||| | || |||||||| Sbjct 244 AGTCTGCTGGTGCTAAAAAACAATCGCGGCGTGGAAGCCAACCGGGTGCGGCATATGGAT 303 Query 42293 TACGG 42297 ||||| Sbjct 304 TACGG 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539597904431680