Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq21718 125 5e-24
seq16708 120 2e-22
seq21758 87.8 1e-12
seq36416 84.2 1e-11
>seq21718
Length=958615
Score = 125 bits (138), Expect = 5e-24
Identities = 144/191 (75%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| |||||||| ||||| |||||||| || ||||| || || | |
Sbjct 51270 ATGCAGATATTCGTGAAAACCCTGACGGGTAAAACGATTACCCTCGAGGTAGAGGCTTCC 51211
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | ||| |||| | || |||||||| || | || || |||||
Sbjct 51210 GACACTATCGAGAATGTGAAAGCAAAGA-TTCAAGACAAAGAGGGAATCCCACCCGATCA 51152
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||||| || ||||| || || ||| |||| || | |||||| | |||||| ||
Sbjct 51151 ACAGCGTTTGATCTTTGCTGGAAAGCAATTGGAGGATGGACGCACCCTTTCCGATTATAA 51092
Query 23790 CATACAAAAAG 23800
||| || ||||
Sbjct 51091 CATTCAGAAAG 51081
>seq16708
Length=1145218
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || ||||| || ||||| ||||| || ||||| || || |
Sbjct 654270 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCCTC 654211
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | ||| | ||||| ||||| || || | || || ||||
Sbjct 654210 TGACACGATCGAGAATGTGAAAGC-CAAAATCCAGGACAAGGAGGGAATTCCTCCTGATC 654152
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| |||||||| || || || ||||| || ||||| || | ||| ||||| || ||||
Sbjct 654151 AGCAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAGGATGGACGTACTTTGTCGGACTACA 654092
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| || || ||||| || | ||||| || | || | || ||||||
Sbjct 654091 ACATTCAGAAGGAGTCTACTCTTCATTTGGTCCTGAGACTTCGTGGAGGA 654042
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || ||||| || ||||| ||||| || ||||| || || |
Sbjct 654726 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCCTC 654667
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | ||| | |||| | ||||| || || | || || ||||
Sbjct 654666 TGACACGATCGAGAATGTGAAAGCCAAAA-TCCAGGACAAGGAGGGAATTCCTCCTGATC 654608
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| |||||||| || || || ||||| || | || || | ||| ||| || |||||||
Sbjct 654607 AGCAGCGTTTGATCTTCGCTGGCAAGCAGTTAGAGGATGGACGAACTCTATCTGATTACA 654548
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| ||||| |||||||| | ||| | || | || | || ||||||
Sbjct 654547 ACATCCAAAAGGAGTCCACGCTTCATCTGGTCCTGAGACTTCGTGGAGGA 654498
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || ||||| || ||||| ||||| | ||||| || || |
Sbjct 654042 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACCATCACCTTGGAAGTCGAAGCCTC 653983
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | ||| | |||| | ||||| || || | || || ||||
Sbjct 653982 TGACACGATCGAGAATGTGAAAGCCAAAA-TCCAGGACAAGGAGGGAATTCCTCCTGATC 653924
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| |||||||| || || || ||||| || | || || | ||| ||| || |||||||
Sbjct 653923 AGCAGCGTTTGATCTTCGCTGGCAAGCAGTTAGAGGATGGACGAACTCTATCTGATTACA 653864
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||| ||||| |||||||| | ||| | || | || | ||||||||
Sbjct 653863 ACATCCAAAAGGAGTCCACGCTTCATCTGGTCCTGAGACTTCGAGGAGG 653815
Score = 114 bits (126), Expect = 9e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || ||||| | || || || || ||||| | ||||| || | |
Sbjct 1010788 AATGCAGATTTTTGTGAAAACGTTGACTGGGAAGACTATCACATTGGAAGTCGAGGCTTC 1010729
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||| ||| | || | |||||| |||||||| || |||| || ||||
Sbjct 1010728 TGATACGATTGAGAATGTCAAGGC-CAAAATTCAGGACAAAGAGGGAATACCTCCGGATC 1010670
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| || ||||| |||||||| || || ||||| || | |||||| | |||||||
Sbjct 1010669 AACAACGATTAATCTTTGCCGGAAAGCAGCTGGAGGATGGACGCACACTCTCTGATTACA 1010610
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
| ||||| || || ||||| | ||| | ||| || | ||| |||| |||
Sbjct 1010609 ATATACAGAAGGAATCCACTCTTCATCTGGTTCTACGATTGAGAGGTGGA 1010560
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || ||||| || ||||| ||||| || ||||| || | |
Sbjct 654498 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACTATCACCCTGGAAGTCGAAGCTTC 654439
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | |||| | ||| ||||| || || || || | || || |||||
Sbjct 654438 AGATACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAGGGAATTCCTCCTGATCA 654379
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||||| || || || ||||| ||||| || || | ||| ||| || ||||||||
Sbjct 654378 GCAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGAACTCTATCTGATTACAA 654319
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||| || || ||||| || | ||||| || | || | || ||||||
Sbjct 654318 CATTCAGAAGGAGTCTACTCTTCATTTGGTCCTGAGACTTCGTGGAGGA 654270
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || ||||| || ||||| ||||| || ||||| || | |
Sbjct 654954 AATGCAGATTTTCGTAAAGACTCTCACAGGGAAAACTATCACCCTGGAAGTCGAAGCTTC 654895
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | |||| | ||| ||||| || || || || | || || |||||
Sbjct 654894 AGATACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAGGGAATTCCTCCTGATCA 654835
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||||| || || || ||||| ||||| || || | ||| ||| || ||||||||
Sbjct 654834 GCAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGAACTCTATCTGATTACAA 654775
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||| || ||||| || || | ||||| || | || | || ||||||
Sbjct 654774 CATTCAGAAAGAATCTACTCTTCATTTGGTCCTGAGACTTCGTGGAGGA 654726
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || | || ||||| ||||| || ||||| ||||| | |
Sbjct 1011244 AATGCAGATTTTTGTCAAGACTTTGACTGGAAAGACGATAACCCTCGAGGTTGAGGCTTC 1011185
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| | | || |||||| ||||||||||| | || || || ||
Sbjct 1011184 CGATACGATTGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCA 1011125
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| || || || || || || |||||||| ||||| | |||||| | ||||||||
Sbjct 1011124 ACAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAA 1011065
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||||| || || ||||| | ||| | ||| || | ||| |||| |||
Sbjct 1011064 TATACAGAAGGAATCCACTCTTCATCTGGTTCTACGATTGAGAGGCGGA 1011016
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || ||||| || ||||| ||||| || ||||| || | |
Sbjct 655181 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTTCA 655122
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | |||| | ||| ||||| || || ||||| | || || |||||
Sbjct 655121 GACACGATCGAAAACGTGAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 655062
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || || || ||||| ||||| || || | ||| ||| | |||||||||
Sbjct 655061 CAGCGTTTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGTACTCTCTCTGATTACAAC 655002
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|| ||||| |||||||| | ||| | || | || | || ||||||
Sbjct 655001 ATCCAAAAGGAGTCCACGCTTCATCTGGTCCTGAGACTTCGTGGAGGA 654954
Score = 105 bits (116), Expect = 5e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || | || || |||||||| || ||||| ||||| | |
Sbjct 1010332 AATGCAGATTTTTGTAAAGACGTTGACAGGCAAAACGATAACCCTCGAGGTTGAGGCTTC 1010273
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | || | |||| || ||||||||||| | || || || |
Sbjct 1010272 CGACACGATCGAGAATGTCAAGGCCAAAA-TTCAGGACAAAGAAGGAATTCCTCCGGACC 1010214
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| || || || || || || |||||||| ||||| | | | || | |||||| |
Sbjct 1010213 AACAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGAAGAACGCTTTCCGATTATA 1010154
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| || |||||||| || | ||| | ||| || | || |||| |||
Sbjct 1010153 ACATCCAGAAAGAGTCGACCCTTCATCTGGTTCTACGACTGAGAGGCGGA 1010104
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || | || || || ||||| || ||||| ||||| | |
Sbjct 1011016 AATGCAGATTTTTGTCAAGACGTTGACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTC 1010957
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||||| | || || ||| ||||||||||| | || || || ||
Sbjct 1010956 CGATACGATTGAAAACGTCAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCGGACCA 1010897
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| || | || || || || |||||||| ||||| | |||||| | ||||||||
Sbjct 1010896 ACAACGACTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAA 1010837
Query 23790 CATACAAAAAGAGTCCAC 23807
||||||||||| |||||
Sbjct 1010836 TATACAAAAAGAATCCAC 1010819
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || || || ||||| || ||||| ||||| | |
Sbjct 1011471 ATGCAGATCTTCGTCAAGACGTTAACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTCC 1011412
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | | || |||||| ||||||||||| | || || || |||
Sbjct 1011411 GATACGATTGAGAACGTCAAGGCCAAAATTCAGGACAAAGAAGGAATTCCTCCGGACCAA 1011352
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| || || || || || || |||||||| ||||| | |||||| | ||||||||
Sbjct 1011351 CAACGATTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCTCTGATTACAAT 1011292
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||||| || || ||||| | ||| | ||| || | || |||| |||
Sbjct 1011291 ATACAGAAGGAATCCACTCTTCATCTGGTTCTACGACTGAGAGGCGGA 1011244
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || | || || || ||||| || ||||| ||||| | |
Sbjct 1010560 AATGCAGATTTTTGTCAAGACATTGACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTC 1010501
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || | || ||| | || | || ||| |||||||| || |||| || || |
Sbjct 1010500 CGATACGATCGAGAATGTCAAGGC-CAAGATTCAGGACAAAGAGGGAATACCTCCGGACC 1010442
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| || | || || || || |||||||| ||||| | ||||| | |||||||
Sbjct 1010441 AACAACGACTGATCTTCGCTGGAAAACAACTCGAAGATGGGCGCACACTCTCTGATTACA 1010382
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
| ||||| || || ||||| | ||| | ||| || | || |||| |||
Sbjct 1010381 ATATACAGAAGGAATCCACTCTTCATCTGGTTCTACGACTGAGAGGCGGA 1010332
>seq21758
Length=261
Score = 87.8 bits (96), Expect = 1e-12
Identities = 120/165 (73%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || ||||| | || || || || ||||| | ||||| || | |
Sbjct 98 AATGCAGATTTTTGTGAAAACGTTGACTGGGAAGACTATCACATTGGAAGTCGAGGCTTC 157
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||| ||| | || | |||||| |||||||| || |||| || ||||
Sbjct 158 TGATACGATTGAGAATGTCAAGGC-CAAAATTCAGGACAAAGAGGGAATACCTCCGGATC 216
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA 23773
|||| || ||||| |||||||| || || ||||| || | |||||
Sbjct 217 AACAACGATTAATCTTTGCCGGAAAGCAGCTGGAGGATGGACGCA 261
>seq36416
Length=241146
Score = 84.2 bits (92), Expect = 1e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 23719 CCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTA 23778
|| || |||||||| | | || ||||||||||||||| |||| || | | ||| |
Sbjct 80536 CCACCCGATCAACAAAGACTGATTTTTGCCGGCAAACAATTGGAGGATGGGAGAACTCTG 80595
Query 23779 GGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| ||||| |||||||| |||||||| || ||| | ||| |||| ||
Sbjct 80596 TCCGATTATAACATCCAAAAGGAGTCCACGTTACATTTGGTGTTACGCTTGAGAGGCGG 80654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337801285528544
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