Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq10258 100 9e-17 >seq10258 Length=339 Score = 100 bits (110), Expect = 9e-17 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 |||||||||||| || ||||| | |||||||||| ||||||||||||||||| | || Sbjct 123 GTGATAGACCTCATCACGGTAGATAAACATGATCAGATCGGCGTCCTGCTCGATAGAACC 64 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGT 34162 ||||||||||||||| || | | || ||||| ||||| || || || ||| ||||| Sbjct 63 GGACTCGCGCAGGTCGGAGTTTACGGGACGCTT-ATCGGCGCGTTGTTCAAGGCTGCGGT 5 Query 34163 TGAG 34166 | || Sbjct 4 TCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160367642170320