Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_030953.1 Length=170650 Score E Sequences producing significant alignments: (Bits) Value seq12851 120 3e-22 >seq12851 Length=316 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 88508 TGAACGCCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 88567 || ||||| ||||||||||| || | ||||| |||| ||||| || ||||| | Sbjct 314 TGTACGCCGTAATCCATATGCCGCACCCGGTTGGCTTCCACGCCGCGATTGTTTTTTAGC 255 Query 88568 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 88627 || || ||| |||| | ||||||||||| |||||||| | || || |||||||| Sbjct 254 ACCAGCAGACTTTCGATCTCCAAATGCCACATAGGATAGAACAACGTGGCCGCGCCGCCG 195 Query 88628 CGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATA 88687 || | || ||||| ||||| ||||| || || ||||| |||||||| | || |||||| Sbjct 194 CGCACGCCGCCCTGAGAACAGGATTTGACCGCGGTCTGGAAATGTTTATAGAACGGAATA 135 Query 88688 ACACCAGTATG 88698 ||| ||||| Sbjct 134 CAACCGGTATG 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545606903740800