Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq12851 111 2e-19 >seq12851 Length=316 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 152203 CCATACTGGTGTTATTCCTTTTTGGAAACATTTTCAGACTGCTGTTAAATCATGCTCACA 152262 |||||| ||| |||||| || | |||||||| ||||| || || ||||| || || || Sbjct 123 CCATACCGGTTGTATTCCGTTCTATAAACATTTCCAGACCGCGGTCAAATCCTGTTCTCA 182 Query 152263 GGGTGGAATTCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGA 152322 ||| || | || |||||||| || || | |||||||| ||||||||||| | || Sbjct 183 GGGCGGCGTGCGCGGCGGCGCGGCCACGTTGTTCTATCCTATGTGGCATTTGGAGATCGA 242 Query 152323 AAATCTTCTCGTTTTGAAAAATAACAAAGGCGTAGAAGAAAACCGCATCCGTCATATGGA 152382 || ||| || || | ||||| || ||||| |||| ||||| | || |||||||| Sbjct 243 AAGTCTGCTGGTGCTAAAAAACAATCGCGGCGTGGAAGCCAACCGGGTGCGGCATATGGA 302 Query 152383 TTATAGTGTTCAGC 152396 ||| | || |||| Sbjct 303 TTACGGCGTACAGC 316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545990661014400