Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq12851 98.7 1e-15 >seq12851 Length=316 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 61924 GGCGAAGTTCGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAA 61983 ||||||| | ||||| ||| |||||| |||| ||||||||||| || || || ||| Sbjct 112 GGCGAAGCTTTCCATACCGGTTGTATTCCGTTCTATAAACATTTCCAGACCGCGGTCAAA 171 Query 61984 TCTTGTTCTCAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCAC 62043 || |||||||| || || | || || || || || || || ||||| |||||||| Sbjct 172 TCCTGTTCTCAGGGCGGCGTGCGCGGCGGCGCGGCCACGTTGTTCTATCCTATGTGGCAT 231 Query 62044 TTAGAAGTAGAGAACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAAAACCGTATT 62103 || || | || | || | || || ||||| || |||||||| | ||||| | Sbjct 232 TTGGAGATCGAAAGTCTGCTGGTGCTAAAAAACAATCGCGGCGTGGAAGCCAACCGGGTG 291 Query 62104 CGACATATGGACTACGG 62120 || |||||||| ||||| Sbjct 292 CGGCATATGGATTACGG 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542316185119680