Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_031107.1
Length=246291
Score E
Sequences producing significant alignments: (Bits) Value
seq50200 127 3e-24
>seq50200
Length=540
Score = 127 bits (140), Expect = 3e-24
Identities = 167/226 (74%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 202493 TCTTGTCAGCTCTATCAGCG-TAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATCGC 202551
|| ||||||||||||||||| | |||| | || ||||| ||| | |||||||| |||||
Sbjct 476 TCCTGTCAGCTCTATCAGCGCTCATGCG-ATATTTTCCTCGGCCTGCCGTTTAATATCGC 418
Query 202552 GTCTTACGCCTTGCTGGTACACATGTTTGCACAACAG-GCGAACATGGCGGTAGGCGACT 202610
|| |||||||||||||| ||| | || || ||| |||| || ||| | || |
Sbjct 417 CAGCTATGCCTTGCTGGTACATATGCTGGCGCAGCAGTGCGATT-TGCAGGTCTGTGATT 359
Query 202611 TCGTCTGGACAGGTGGTGATACGCATCTGTACTCCAACCATCTGGAACAAGCTGACCTCC 202670
|||||||||| || || ||||| ||||| ||| |||||| || | || || ||||| |
Sbjct 358 TCGTCTGGACCGGAGGCGATACCCATCTCTACAGTAACCATTTGCAGCAGGCGGACCTGC 299
Query 202671 AACTTACCCGTGACCCTAAACCGTTACCGAAGTTGGTTATCAAACG 202716
| || |||||||| ||| ||| | ||| || || | || || ||
Sbjct 298 AGCTAACCCGTGATCCTCTGCCGCTGCCGCAGCTGCTGATTAAGCG 253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787505103177280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |