Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq10258 147 1e-30
seq16755 96.9 2e-15
>seq10258
Length=339
Score = 147 bits (162), Expect = 1e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 96694 ACCAGCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAAT 96753
||||||||| || || || ||||| | || ||||| || | || | ||| ||||||||
Sbjct 243 ACCAGCATAATTGTCGAATCGTGACCACTGTCCGTTGAAGGTCAGCCGCACAGTGCCAAT 184
Query 96754 TGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGG 96813
||||| |||| ||||| |||| ||| | || || || || ||||| ||||||| |
Sbjct 183 GGGGCCGTTTCTCTGCTTGCCGAGAATAATTTCAGCGATACCTTTCATATCGCTATTCTC 124
Query 96814 GTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCC 96873
|||||| || || || || || | |||||||||||| || ||||||||||| || | ||
Sbjct 123 GTGATAGACCTCATCACGGTAGATAAACATGATCAGATCGGCGTCCTGCTCGATAGAACC 64
Query 96874 TGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAG 96924
|| || || | || || ||||| || || || || || || ||||||||
Sbjct 63 GGACTCGCGCAGGTCGGAGTTTACGGGACGCTTATCGGCGCGTTGTTCAAG 13
>seq16755
Length=287
Score = 96.9 bits (106), Expect = 2e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 98311 AAATATGGTGGCCCCTACCGGACTTGAACCGGTGACCGTGCGATTATGAGTCGCCAGCTC 98370
|||||||||||||||| | ||||||||||| | ||| ||||||||||||||| ||||
Sbjct 88 AAATATGGTGGCCCCTGCTGGACTTGAACCAGCGACTAAGCGATTATGAGTCGCTTGCTC 147
Query 98371 TAACCACTGAGCTAAAGGGCC 98391
||||||||||||||| || ||
Sbjct 148 TAACCACTGAGCTAAGGGACC 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330695267650288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |