Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq10258 147 1e-30 seq16755 96.9 2e-15 >seq10258 Length=339 Score = 147 bits (162), Expect = 1e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 96694 ACCAGCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAAT 96753 ||||||||| || || || ||||| | || ||||| || | || | ||| |||||||| Sbjct 243 ACCAGCATAATTGTCGAATCGTGACCACTGTCCGTTGAAGGTCAGCCGCACAGTGCCAAT 184 Query 96754 TGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGG 96813 ||||| |||| ||||| |||| ||| | || || || || ||||| ||||||| | Sbjct 183 GGGGCCGTTTCTCTGCTTGCCGAGAATAATTTCAGCGATACCTTTCATATCGCTATTCTC 124 Query 96814 GTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCC 96873 |||||| || || || || || | |||||||||||| || ||||||||||| || | || Sbjct 123 GTGATAGACCTCATCACGGTAGATAAACATGATCAGATCGGCGTCCTGCTCGATAGAACC 64 Query 96874 TGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAG 96924 || || || | || || ||||| || || || || || || |||||||| Sbjct 63 GGACTCGCGCAGGTCGGAGTTTACGGGACGCTTATCGGCGCGTTGTTCAAG 13 >seq16755 Length=287 Score = 96.9 bits (106), Expect = 2e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 98311 AAATATGGTGGCCCCTACCGGACTTGAACCGGTGACCGTGCGATTATGAGTCGCCAGCTC 98370 |||||||||||||||| | ||||||||||| | ||| ||||||||||||||| |||| Sbjct 88 AAATATGGTGGCCCCTGCTGGACTTGAACCAGCGACTAAGCGATTATGAGTCGCTTGCTC 147 Query 98371 TAACCACTGAGCTAAAGGGCC 98391 ||||||||||||||| || || Sbjct 148 TAACCACTGAGCTAAGGGACC 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330695267650288