Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_031228.1 Length=60606 Score E Sequences producing significant alignments: (Bits) Value seq30442 352 1e-92 >seq30442 Length=231 Score = 352 bits (390), Expect = 1e-92 Identities = 216/230 (94%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 11615 CTCGCCGACATCACGCCGGGCGAACTGGCCGCGCTACGCGAAGCGCTGGACACCAAGACC 11674 |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1 CTCGCCAACATCACGCCGGGCGAACTGGCCGCACTACGCGAAGCGCTGGATACCAAGACC 60 Query 11675 CGCAGCCTCGATACGGCTGAAAGCGCTGTCACCAGCCTGCAAATCCAGTTGGCCGAAGCC 11734 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 CGCAGCCTCGATACGGCGGAAAGCGCTGTCACCAGTCTGCAAATCCAGTTGGCCGAAGCC 120 Query 11735 CACCGCCGACACGCTGACGATAACACCGAGCACGACCGGGAGATCACAAAGCTGCGCGCC 11794 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 121 CATCGCCGACACGCTGACGATAACACCGAGCACGACAGGGAGATCACAAAGCTGCGCGCC 180 Query 11795 ACGGTTAAGTCGCTACAGAACAGCGTACGATACACCCGGCAGTCCGCATC 11844 |||||||||||| | ||||| | |||||| |||||||| |||||||| || Sbjct 181 ACGGTTAAGTCGATGCAGAATAACGTACGGTACACCCGACAGTCCGCGTC 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193701213500288