Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq36416 95.1 1e-14
seq16708 86.0 5e-12
>seq36416
Length=241146
Score = 95.1 bits (104), Expect = 1e-14
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 111213 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111272
|||||||||||| || |||| ||| |||||||||||||| ||| | |||| || ||||
Sbjct 80541 CGATCAACAAAGACTGATTTTTGCCGGCAAACAATTGGAGGATGGGAGAACTCTGTCCGA 80600
Query 111273 TTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327
|||||| || ||||| || || || ||||||| ||||| || || | || |||
Sbjct 80601 TTATAACATCCAAAAGGAGTCCACGTTACATTTGGTGTTACGCTTGAGAGGCGGC 80655
>seq16708
Length=1145218
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
|||||| ||||||||||| |||||||| ||||| || || ||| | || || |
Sbjct 1011016 AATGCAGATTTTTGTCAAGACGTTGACAGGCAAGACGATAACCCTCGAGGTTGAGGCTTC 1010957
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
|||| | ||| | || || || ||| ||||||||||| |||| || ||
Sbjct 1010956 CGATACGATTGAAAACGTCAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCGGACCA 1010897
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111276
|||| | || || | || || |||||| | |||||| | | ||| | | |||||
Sbjct 1010896 ACAACGACTGATCTTCGCTGGAAAACAACTCGAAGATGGACGCACACTCT--CTGATTAC 1010839
Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
||||||||||||||||| || || ||| | || | || || || |||||
Sbjct 1010838 AATATACAAAAAGAATCCACTCTGCATCTTGTACTCCGCCTTCGAGGTGG 1010789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421551238811968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |