Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21]
1,806 sequences; 479,047,742 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq925 107 4e-18
>seq925
Length=3171676
Score = 107 bits (118), Expect = 4e-18
Identities = 216/317 (68%), Gaps = 9/317 (3%)
Strand=Plus/Plus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
|||| ||||| || |||||||| || |||||||| || || ||||| || || |||
Sbjct 2021482 TTGCATTTGCCGCTGTTGAAGGCATATTCTTTAGCGGCAGTTTTGCATCAATCTTTTGGC 2021541
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| ||||| | ||| | |||| || | || | |||||||||||| || || | ||||
Sbjct 2021542 TTAAGAAACGTGGTTTAATGCCGGGCTTAACATTCTCCAATGAGTTGATCTCACGTGACG 2021601
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTT---GATACCC 102095
| ||| | ||| | || || || || || |||| || | |||| | || | ||
Sbjct 2021602 AGGGTTTACATTGTGATTTCGCGTGTTTGATGTTCCAACA----TTTGATACAGA-AACC 2021656
Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155
|| | || ||| | ||| ||||||| | ||||||| || |||||||||||||||
Sbjct 2021657 CAGC-AGGGAACGTATTATTGAAATCATATCTGAAGCAGTTAAAATTGAACAAGAATTCT 2021715
Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215
| |||| | | ||||| || || | || ||||| || | | ||| | || |
Sbjct 2021716 TAACAGACGCATTACCTGTAAACCTAATTGGTATGAATTGTAGTCTCATGTCGGATTATA 2021775
Query 102216 TTGAATTTGTGGCAGAT 102232
||||||| || || |||
Sbjct 2021776 TTGAATTCGTAGCCGAT 2021792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989561101644730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |